Job Description P0A8M3 Confidence 99.97% Date Thu Jan 5 11:08:11 GMT 2012 Rank 45 Aligned Residues 251 % Identity 12% Template d2g4ca2 SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 3.15

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		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.								.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																									.																																	.	.	.	.	.	.	.
Query SS confidence																									.																																	.	.	.	.	.	.	.
Query Sequence		Q	R	L	E	E	A	A	K	R	D	H	R	K	I	G	K	Q	L	D	L	Y	H	M	.	Q	E	E	A	P	G	M	V	F	W	H	N	D	G	W	T	I	F	R	E	L	E	V	F	V	R	S	K	L	K	E	Y	.	.	.	.	.	.	.	Q	Y	Q	E	V	K	G	P	F	M	M	D	R	V	L	W	E
Query Conservation																									.																																	.	.	.	.	.	.	.
Alig confidence													.	.											.																																	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		A	L	L	E	I	C	Q	R	R	H	F	.	.	L	S	G	S	K	Q	Q	L	S	R	D	S	L	L	S	G	C	H	P	G	F	G	P	L	G	V	E	L	R	K	N	L	A	A	E	W	W	T	S	V	V	V	F	R	E	Q	V	F	P	V	D	A	L	H	H	K	P	G	P	L	L	P	G	D	S	A	F
Template Known Secondary structure		S								T	T	S	.	.	B		S		S	S	S	S							T	T		S			B																				T	T	T	T										S				S				S				S
Template Predicted Secondary structure													.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.													320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																															.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.																															.
Query Sequence		K	T	G	H	W	D	N	Y	K	D	A	M	F	T	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S	E	N	R	E	Y	C	I	K	P	M	N	C	P	G	H	V	Q	I	F	N	Q	G	L	K	S	Y	R	.	D	L	P	L	R	M	A	E	F	G	S	C	H	R	N	E	P	S	G	S	L	H	G
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.																															.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																															.																	.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		R	L	V	S	A	E	T	L	R	E	I	L	Q	D	K	E	L	S	K	E	Q	L	V	T	F	L	E	N	V	L	K	T	S	G	K	L	R	E	N	L	L	H	G	A	L	E	H	Y	V	N	C	L	D	L	V	N	K	R	L	P	Y	G	L	A	Q	I	G	V	C	F	H	P	V	.	.	.	.	.	.	.
Template Known Secondary structure			B							G	G	G	S	S	S		T	T	T	T	T	G	G	G	T	T									B				S		S						T	T							T	T	T	T	B	S															.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	R	V	R	G	F	T	Q	D	D	A	H	I	F	C	T	E	E	Q	I	R	D	E	V	N	G	C	I	R	L	V	Y	D	M	Y	S	T	F	G	F	E	K	I	V	V	K	L	S	T	R	P	E	K	R	I	G	S	D	E	M	W	D	R	A	E	A	D	L	A	V	A	L	E	E	N	N	I	P	F
Query Conservation
Alig confidence		.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	K	S	I	G	E	K	T	E	A	S	L	V	W	F	T	P	P	R	T	S	N	Q	W	L	D	F	W	L	R	H	R	L	Q	W	W	R	K	F	A	M	S	P	S	N	F	S	S	S	D	C	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.																																					T	T		S		G	G	G								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		453	.	.	.	.	.	.	460	.	.	.		.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.			.	.	.	.	490	.	.	.				.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure													.																							.	.									.	.	.
Query SS confidence													.																							.	.									.	.	.
Query Sequence		E	Y	Q	L	G	E	G	A	F	Y	G	.	P	K	I	E	F	T	L	Y	D	C	L	D	R	A	W	Q	C	G	T	V	Q	L	.	.	D	F	S	L	P	S	R	L	.	.	.	S	A	S	Y	V	G	E	D	N	E	R	K	V	P	V	M	I	H	R	A	I	L	G	S	M	E	R	F	I	G	I	L	T
Query Conservation													.																							.	.									.	.	.
Alig confidence		.	.	.	.	.	.	.					.															.								.	.									.	.	.
Template Conservation		.	.	.	.	.	.	.																				.
Template Sequence		.	.	.	.	.	.	.	D	E	E	G	R	K	G	N	K	L	Y	Y	N	F	P	W	G	K	E	.	L	I	E	T	L	W	N	L	G	D	H	E	L	L	H	M	Y	P	G	N	V	S	K	L	H	G	R	D	G	R	K	N	V	V	P	C	V	L	S	V	N	G	D	L	D	R	G	M	L	A	Y	L	Y
Template Known Secondary structure		.	.	.	.	.	.	.		S	S	S	S										T	T				.									T	T							S		S		G	G	G	S				S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																				.
Template SS confidence
									280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		527	.	.	530
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	F	Q
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions