 |
Job Description | P0A8M3 | Confidence | 44.05% | Date | Thu Jan 5 11:08:11 GMT 2012 |
Rank | 150 | Aligned Residues | 87 |
% Identity | 15% | Template | d1o6da_ |
SCOP info | alpha/beta knot
| alpha/beta knot
| YbeA-like
|
Resolution | 1.66 |
|
 |
  |   |
510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | |
|
|
|
|
. |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
Query Sequence |   |
I | H | R | A | I | L | G | S | M | E | R | F | I | G | I | L | T | E | E | F | A | G | F | F | P | T | W | L | A | P | V | Q | V | V | I | M | N | . |
. |
. |
. |
. |
. |
I | T | D | S | Q | S | E | Y | V | N | E | L | T | Q | K | L | S | N | A | G | I | R | V | K | A | D | L | R | N | E | K | . |
. |
. |
. |
. |
I |
Query Conservation |   |
|   |   |
|   |   |
|
|   |
|
|   |
|   |   |
|   |
|   |   |   |
|   |   |
|   |   |
|
|
|   |
|
|   |
|
|
| . | . | . | . | . | . |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |   |
|   |   |   |   |   | . | . | . | . | . |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
Template Conservation |   |
|   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|   |   |   | . |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |   |   |
|   |   |
|
Template Sequence |   |
V | R | I | A | V | I | G | K | L | D | G | F | I | K | E | G | I | K | H | Y | E | K | F | L | R | R | F | . |
C | K | P | E | V | L | E | I | K | R | V | H | R | G | S | I | E | E | I | V | R | K | E | T | E | D | L | T | N | R | I | L | P | G | S | F | V | M | V | M | D | K | R | G | E | E | V | S | S | E | E | F |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | . |
|  |  |  |  |  |  |  |
|
|
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
579 | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | F | K | I | R | E | H | T | L | R | R | V | P | Y | M | L | V | C | G |
Query Conservation |   |
  |
|
|
|
|   |
|   |   |   |
|
|
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|
Template Sequence |   |
A | D | F | L | K | D | L | E | M | K | G | K | D | I | T | I | L | I | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|