Job Description P0A8M3 Confidence 99.66% Date Thu Jan 5 11:08:11 GMT 2012 Rank 79 Aligned Residues 152 % Identity 18% Template d1jjca_ SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.						.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.																						.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.																						.	.	.	.	.	.	.
Query Sequence		M	Q	E	E	A	P	G	M	V	F	W	H	N	D	G	W	T	I	F	R	E	L	E	V	F	V	R	S	K	L	K	E	Y	Q	Y	Q	E	V	K	G	P	F	M	M	D	R	V	.	.	.	.	.	L	W	E	K	T	G	H	W	D	N	Y	K	D	A	M	F	T	T	S	S	E	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.																						.	.	.	.	.	.	.
Alig confidence									.																																								.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		V	D	V	S	L	P	G	.	A	S	L	F	S	G	G	L	H	P	I	T	L	M	E	R	E	L	V	E	I	F	R	A	L	G	Y	Q	A	V	E	G	P	E	V	E	S	E	F	F	N	F	D	A	L	N	I	P	E	H	H	P	A	R	D	M	W	D	T	F	W	L	T	G	E	G	F	R	L	E	G	P
Template Known Secondary structure				T	T	S			.																								T	T	T								S								T	G	G	G	T			T	T	S	G	G	G	G	G	S				B				S	S						T
Template Predicted Secondary structure									.
Template SS confidence
		86	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
							324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	N	R	E	Y	C	I	K	P	M	N	C	P	G	H	V	Q	I	F	N	Q	G	L	K	S	Y	R	D	L	P	L	R	M	A	E	F	G	S	C	H	R	N	E	P	S	G	S	L	H	G	L	M	R	V	R	G	F	T	Q	D	D	A	H	I	F	C	T	E	E	Q	I	R	D	E	V	N
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																								.	.	.	.	.																				.	.	.	.																						.	.	.
Template Conservation																														.	.	.	.	.																				.	.	.	.																						.	.	.
Template Sequence		L	G	E	E	V	E	G	R	L	L	L	R	T	H	T	S	P	M	Q	V	R	Y	M	V	A	H	T	P	.	.	.	.	.	P	F	R	I	V	V	P	G	R	V	F	R	F	E	Q	T	D	A	T	.	.	.	.	H	E	A	V	F	H	Q	L	E	G	L	V	V	G	E	G	I	A	M	A	H	.	.	.
Template Known Secondary structure		T	S					S						S	S	S	T										S		S	.	.	.	.	.	S													S				S	S	.	.	.	.			S												T	T						.	.	.
Template Predicted Secondary structure																														.	.	.	.	.																				.	.	.	.																						.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	I	R	L	V	Y	D	M	Y	S	T	F	G	F	E	K	I	V	V	K	L	S
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	L	K	G	A	I	Y	E	L	A	Q	A	L	F	G	P	D	S	K	V	R	F	Q
Template Known Secondary structure		.															T	T
Template Predicted Secondary structure		.
Template SS confidence
			233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions