 |
Job Description | P0A8M3 | Confidence | 21.59% | Date | Thu Jan 5 11:08:11 GMT 2012 |
Rank | 181 | Aligned Residues | 78 |
% Identity | 22% | Template | d1ebda2 |
SCOP info | FAD/NAD(P)-binding domain
| FAD/NAD(P)-binding domain
| FAD/NAD-linked reductases, N-terminal and central domains
|
Resolution | 2.60 |
|
 |
  |   |
539 | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | |
|
. | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  | . | . |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
Query Sequence |   |
P | V | Q | V | V | I | M | N | I | T | D | S | Q | S | E | Y | V | N | E | L | T | Q | K | L | S | N | A | G | I | R | V | K | A | D | L | R | N | E | K | I | G | F | K | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | E | H | T | L | R | R | V | P | Y | M | L | V | C | G | D | K | E | V | E | . |
. |
S | G | K | V | A |
Query Conservation |   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |   |
|   |   |   |   |   |
|   |
|
|
| . | . | . | . | . | . | . | . | . |
|   |
|   |   |   |
|
|
|   |   |
|
|
|
|   |   |
|   |   | . | . |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|
|
|
|   | . | . | . | . |
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
Template Sequence |   |
P | K | S | L | V | V | I | G | G | G | Y | . |
. |
. |
. |
I | G | I | E | L | G | T | A | Y | A | N | F | G | T | K | V | T | I | L | E | G | A | G | E | I | L | S | G | F | E | K | Q | M | A | A | I | I | K | K | R | L | K | K | K | G | V | E | V | V | T | N | A | L | A | K | G | A | E | E | R | E | D | G | V | T |
Template Known Secondary structure |   |
| S |  |  |  |  |  |
|
| S |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S | S | S | S | S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  | S |  |  |  |  |  |  |  |  |  | T | T |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | |
|
|
|
. | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . |
  |
  |   |
608 | . | 610 | . | . | . | . | . | . | . | . | . | 620 |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | R | T | R | R | G | K | D | L | G | S | M | D |
Query Conservation |   |
|
|   |   |   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |   |   |   |
|   |
Template Sequence |   |
V | T | Y | E | A | N | G | E | T | K | T | I | D |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
252 | . | . | . | . | . | . | . | 260 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|