Job Description P0A8M3 Confidence 99.74% Date Thu Jan 5 11:08:11 GMT 2012 Rank 77 Aligned Residues 249 % Identity 17% Template d1c0aa3 SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 2.40

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		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		W	T	I	F	R	E	L	E	V	F	V	R	S	K	L	K	E	Y	Q	Y	Q	E	V	K	G	P	F	M	M	D	R	V	L	W	E	K	T	G	H	W	D	N	Y	K	D	A	M	F	T	T	.	.	S	S	E	N	R	E	Y	C	I	K	P	M	N	C	P	G	H	V	Q	I	F	N	Q	G	L	K	S	Y
Query Conservation																																																				.	.
Alig confidence																																		.	.	.	.	.	.	.	.											.	.																											.	.
Template Conservation																																		.	.	.	.	.	.	.	.																																							.	.
Template Sequence		L	K	T	R	A	K	I	T	S	L	V	R	R	F	M	D	D	H	G	F	L	D	I	E	T	P	M	L	T	K	A	T	.	.	.	.	.	.	.	.	P	E	G	A	R	D	Y	L	V	P	S	R	V	H	K	G	K	F	Y	A	L	P	Q	S	P	Q	L	F	K	Q	L	L	M	M	S	G	F	D	.	.
Template Known Secondary structure																			T	T								S	S	B				.	.	.	.	.	.	.	.	S	S	S	S								S	S	S	T	T							S		S										T	T			.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.																																							.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		R	D	L	P	L	R	M	A	E	F	G	S	C	H	R	N	E	P	S	G	S	L	H	G	L	M	R	V	R	G	F	T	Q	D	D	A	H	I	F	.	C	T	E	E	Q	I	R	D	E	V	N	G	C	I	R	L	V	Y	D	M	Y	S	T	F	G	F	E	K	I	V	V	K	L	S	T	R	P	E	K	R
Query Conservation																																									.
Alig confidence		.	.	.	.	.																		.	.	.	.														.																																		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																		.	.	.	.																																																.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	R	Y	Y	Q	I	V	K	C	F	R	D	E	D	L	R	A	D	.	.	.	.	R	Q	P	E	F	T	Q	I	D	V	E	T	S	F	M	T	A	P	Q	V	R	E	V	M	E	A	L	V	R	H	L	W	L	E	V	K	G	V	D	L	G	D	F	P	V	M	T	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.															B	T	T	.	.	.	.	B		S											S																							S					S						.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.																		.	.	.	.																																																.	.	.	.	.	.	.
Template SS confidence
							208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.		.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.																	.	.	.	.	490
Predicted Secondary structure																												.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	S	D	E	M	W	D	R	A	E	A	D	L	A	V	A	L	E	E	N	N	I	P	F	E	.	Y	Q	L	G	E	G	A	F	Y	G	P	K	I	E	F	T	L	Y	D	C	L	D	R	A	W	Q	C	G	T	V	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	S	L	P
Query Conservation																												.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.														.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	E	A	E	R	R	Y	G	S	D	K	P	D	L	R	D	E	S	K	W	A	P	L	W	V	I	D	F	P	M	F	E	D	D	G	E	G	G	L	T	A	M	H	H	P	F	T	S	P	K	D	M	T	A	A	E	L	K	A	A	P	E	N	A	V	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.									S		S	S							S											B	S					S	S	S					S	S		T	T	B		B	S	S									S		T	T		B	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		491	.	.	.	.	.	.	.	.	500	.																																							.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	L	S	A	S	Y	V	G	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	R	K	V	P	V	M	I	H	R	A	I	L	G	S	M	E	R	F	I	G	I	L	T	E	E	F	A	G	F
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																																																																.	.
Template Sequence		N	A	Y	D	M	V	I	N	G	Y	E	V	G	G	G	S	V	R	I	H	N	G	D	M	Q	Q	T	V	F	G	I	L	G	I	N	E	E	E	Q	R	E	K	F	G	F	L	L	D	A	L	K	Y	G	T	P	P	H	A	G	L	A	F	.	.	G	L	D	R	L	T	M	L	L	T	G	T	D	N	I	R
Template Known Secondary structure		S							T	T									B														T	T																	T	T	T	T										.	.											T		S		G	G
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.			.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
						533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.			.	.	.	.	560	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																								.	.
Query SS confidence		.	.	.	.																								.	.
Query Sequence		.	.	.	.	F	P	T	W	L	A	P	V	Q	V	V	I	M	N	I	T	D	S	Q	S	E	Y	V	.	.	N	E	L	T	Q	K	L	S	N	A	G	I	R	V
Query Conservation		.	.	.	.																								.	.
Alig confidence		.	.	.	.							.	.	.	.	.	.	.	.	.									.	.
Template Conservation												.	.	.	.	.	.	.	.	.
Template Sequence		D	V	I	A	F	P	K	T	T	A	.	.	.	.	.	.	.	.	.	A	A	C	L	M	T	E	A	P	S	F	A	N	P	T	A	L	A	E	L	S	I	Q	V
Template Known Secondary structure		G	G	S	S	S				T	T	.	.	.	.	.	.	.	.	.	S		B	T	T	T	T	B	S											T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Template SS confidence
		550	.	.	.	.	.	.	.	.	.										560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions