Job Description P0A8M3 Confidence 100.00% Date Thu Jan 5 11:08:11 GMT 2012 Rank 25 Aligned Residues 335 % Identity 16% Template c3qo8A_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase, cytoplasmic; PDBTitle: crystal structure of seryl-trna synthetase from candida albicans Resolution 2.00 Å

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	E	Y	V	D	M	C	R	G	P	H	V	P	N	M	R	F	C	H	H	F	K	L	M	K	T	A	G	A	Y	W	R	G	D	S	N	N	K	M	L	Q	R	I	Y	G	T	A	W	A	D	K	K	A	L	N	A	Y	L	Q	R	L	E	E	A	A	K	R	D	H	R	K	I	G	K	Q	L	D	L	Y
Query Conservation
Alig confidence																																																	.	.
Template Conservation																																																	.	.
Template Sequence		K	K	E	I	I	E	K	E	A	E	A	D	K	N	L	R	S	K	I	N	Q	V	G	N	I	V	H	E	S	V	V	D	S	Q	D	E	E	N	N	E	L	V	R	T	W	T	P	.	.	E	N	Y	K	K	P	E	Q	I	A	A	A	T	G	A	P	A	K	L	S	H	H	E	V	L	L	R	L	D	G	Y
Template Known Secondary structure																							S						T	T	S				S		G	G	G										.	.	T	T			S	S	S	S	B		T	T	T			B			S									T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		255	.	.				.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure					.	.	.			.
Query SS confidence					.	.	.			.
Query Sequence		H	M	Q	.	.	.	E	E	.	A	P	G	M	V	F	W	H	N	D	G	W	T	I	F	R	E	L	E	V	F	V	R	S	K	L	K	E	Y	Q	Y	Q	E	V	K	G	P	F	M	M	D	R	V	L	W	E	K	T	G	H	W	D	N	Y	K	D	A	M	F	T	T	S	S	E	N	R	E	Y	C	I	K
Query Conservation					.	.	.			.
Alig confidence					.	.	.			.
Template Conservation
Template Sequence		D	P	E	R	G	V	R	I	V	G	H	R	G	Y	F	L	R	N	Y	G	V	F	L	N	Q	A	L	I	N	Y	G	L	S	F	L	S	S	K	G	Y	V	P	L	Q	A	P	V	M	M	N	K	E	V	M	A	K	T	A	Q	L	S	Q	F	D	E	E	L	Y	K	V	I	D	G	E	D	E	K	Y	L	I
Template Known Secondary structure												T	T						T																			T	T	T								S								T	T	T	S								T							T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.			.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																	.	.																								.	.	.
Query SS confidence																	.	.																								.	.	.
Query Sequence		P	M	N	C	P	G	H	V	Q	I	F	N	Q	G	L	.	.	K	S	Y	R	D	L	P	L	R	M	A	E	F	G	S	C	H	R	N	E	P	S	G	.	.	.	S	L	H	G	L	M	R	V	R	G	F	T	Q	D	D	A	H	I	F	C	T	E	E	Q	I	R	D	E	V	N	G	C	I	R	L	V	Y
Query Conservation																	.	.																								.	.	.
Alig confidence																	.	.																								.	.	.
Template Conservation
Template Sequence		A	T	S	E	Q	P	I	S	A	Y	H	A	G	E	W	F	E	S	P	A	E	Q	L	P	V	R	Y	A	G	Y	S	S	C	F	R	R	E	A	G	S	H	G	K	D	A	W	G	I	F	R	V	H	A	F	E	K	I	E	Q	F	V	L	T	E	P	E	K	S	W	E	E	F	D	R	M	I	G	C	S	E
Template Known Secondary structure		S	S	T						T	T	T	T	T				S	S																				T	T			S	T	T		S	S	S	S	S		S													G	G	G
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470		.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		D	M	Y	S	T	F	G	F	E	K	I	V	V	K	L	S	T	R	P	E	K	R	I	G	S	D	E	M	W	D	R	A	E	A	D	L	A	V	A	L	E	E	N	N	I	P	F	E	Y	Q	L	G	E	G	A	F	Y	G	P	K	I	E	F	T	L	.	Y	D	C	L	D	R	A	W	Q	C	G	T	V	Q
Query Conservation																																																																			.
Alig confidence											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	Y	Q	S	L	G	L	P	.	Y	R	V	V	G	I	V	S	G	E	L	N	N	A	A	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	D	L	E	A	W	F	P	F	Q	Q	E	Y	K	E	L	V	S	C	S
Template Known Secondary structure							T	T			.								G	G	G			T	T		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T	T
Template Predicted Secondary structure											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350																																	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
				485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.					.	.	.	.	.	.	.	540				.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure		.	.																																																	.	.	.	.									.	.	.
Query SS confidence		.	.																																																	.	.	.	.									.	.	.
Query Sequence		.	.	L	D	F	S	L	P	S	R	L	S	A	S	Y	V	G	E	D	N	E	R	K	V	P	V	M	I	H	R	A	I	L	G	S	M	E	R	F	I	G	I	L	T	E	E	F	A	G	F	.	.	.	.	F	P	T	W	L	A	P	V	.	.	.	Q	V	V	I	M	N	I	T	D	S
Query Conservation		.	.																																																	.	.	.	.									.	.	.
Alig confidence		.	.					.									.	.	.	.																.																.	.	.	.									.	.	.
Template Conservation								.									.	.	.	.																.
Template Sequence		N	C	T	D	Y	Q	.	S	R	N	L	E	I	R	C	.	.	.	.	G	I	K	K	Y	V	H	C	L	N	S	T	L	S	A	.	T	E	R	T	I	C	C	I	L	E	N	Y	Q	K	E	D	G	L	V	I	P	E	V	L	R	K	Y	I	P	G	E	P	E	F	I	P	Y	I	K	E
Template Known Secondary structure				T	T			.					T				.	.	.	.					B											.															T	T						G	G	G	G	G	G	S	T	T			S						S
Template Predicted Secondary structure								.									.	.	.	.																.
Template SS confidence
		372	.	.	.	.	.		.	.	380	.	.	.	.	.					.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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