Job Description P0A8M3 Confidence 100.00% Date Thu Jan 5 11:08:11 GMT 2012 Rank 39 Aligned Residues 325 % Identity 13% Template c3od1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:atp phosphoribosyltransferase regulatory subunit; PDBTitle: the crystal structure of an atp phosphoribosyltransferase regulatory2 subunit/histidyl-trna synthetase from bacillus halodurans c Resolution 1.97 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		E	E	A	P	G	M	V	F	W	H	N	D	G	W	T	I	F	R	E	L	E	V	F	V	R	S	K	L	K	E	Y	Q	Y	Q	E	V	K	G	P	F	M	M	D	R	V	L	W	E	K	T	G	H	W	D	N	Y	K	D	A	M	F	T	T	S	S	E	.	N	R	E	Y	C	I	K	P	M	N	C	P	G
Query Conservation																																																																				.
Alig confidence																																																					.	.														.
Template Conservation																																																					.	.
Template Sequence		E	K	P	F	G	X	R	D	T	L	P	E	W	Y	K	T	K	K	N	I	C	D	Q	X	T	E	E	I	N	L	W	G	Y	D	X	I	E	T	P	T	L	E	Y	Y	E	T	V	G	V	V	S	.	.	A	I	L	D	Q	Q	L	F	K	L	L	D	Q	Q	G	N	T	L	V	L	R	P	D	X	T	A	P
Template Known Secondary structure					T	T																										T	T								S				T	T	T					S	.	.	S	S		G	G	G	S						T	T	S							S		S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	Q	I	F	N	Q	G	L	K	S	Y	R	D	L	P	L	R	M	A	E	F	G	S	C	H	R	N	E	P	S	G	S	L	H	G	L	M	R	V	R	G	F	T	Q	D	D	A	H	I	F	C	T	E	E	Q	I	R	D	E	V	N	G	C	I	R	L	V	Y	D	M	Y	S	T	F	G	F	E	K	I
Query Conservation
Alig confidence													.																			.	.	.		.	.	.	.																						.	.
Template Conservation													.																			.	.	.		.	.	.	.																						.	.
Template Sequence		I	A	R	L	V	A	S	S	L	K	D	.	R	A	Y	P	L	R	L	A	Y	Q	S	N	V	Y	R	A	Q	Q	.	.	.	G	.	.	.	.	K	P	A	E	F	E	Q	L	G	V	E	L	I	G	D	G	T	A	S	A	D	.	.	G	E	V	I	A	L	X	I	A	A	L	K	R	A	G	L	S	E	F
Template Known Secondary structure											S	S	.	S		S																.	.	.		.	.	.	.			S											S			S					.	.														T	T			S
Template Predicted Secondary structure													.																			.	.	.		.	.	.	.																						.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		417	.	.	420	.	.	.	.							.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.																						.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	K	L	S	T	R	P	.	.	.	.	.	.	E	K	R	I	G	S	D	E	M	W	D	R	A	E	A	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	A	L	E	E	N	N	I	P	F	E	Y	Q	L	G	E	G	A	F	Y	G	P	K	I	E	F	T
Query Conservation										.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	A	I	G	H	V	G	Y	V	N	A	L	L	X	D	V	V	G	N	E	Q	R	A	D	R	L	R	R	F	L	Y	E	K	N	Y	V	G	Y	R	E	H	V	K	S	L	N	L	S	T	I	D	K	S	R	L	X	N	L	L	S	L	R	G	G	R	A	A	I	E	E	A	R	G	L	I	Q	T	E	K
Template Known Secondary structure																																		T	T												S	S	S											G	G	G				S									T	T			S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.							.	.	.	.	.	530	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	D	C	L	D	R	A	W	Q	C	G	T	V	Q	L	D	F	S	L	P	S	R	L	S	A	S	Y	V	G	E	D	N	E	R	K	V	P	V	M	I	H	R	A	I	L	G	S	M	E	R	F	I	G	I	.	.	.	.	.	.	L	T	E	E	F	A	G	F	F	P	.	.	.	.	.	.	.	.	.
Query Conservation																																																									.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	T	A	L	A	E	X	T	K	L	Y	E	V	L	E	S	Y	G	A	S	E	Y	V	K	F	D	L	T	L	V	L	H	X	S	Y	Y	T	G	V	V	F	E	G	Y	G	N	R	L	G	V	P	L	C	S	G	G	R	Y	D	E	L	L	S	K	F	H	R	P	A	Q	A	T	G	F	G	V	R	I	D
Template Known Secondary structure																			T	T		G	G	G					T	T			S		S	S	S			S								T	T		S	S									T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
					535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	T	W	L	A	P	V	Q	V	V	I	M	N	I	T	D	S	Q	S	E	Y	V	N	E	L	T	Q	K	L	S	N	A	G	I	R	V	K	A	D	L	R	N	E	K	I	G	F	K	I	R	E	H	T	L	R	R	V	P	Y	M	L
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		L	L	V	E	A	L	N	G	H	E	Q	T	C	I	L	F	S	N	E	R	R	F	E	A	I	E	L	A	R	K	K	R	A	N	G	E	A	V	V	L	Q	D	L	A	G	V	T	D	V	D	A	X	S	S	N	Y	Q	D	V	I	Y	C	I
Template Known Secondary structure																			G	G	G													T	T	T								G	G	G		S							T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions