Job Description P0A8M3 Confidence 100.00% Date Thu Jan 5 11:08:11 GMT 2012 Rank 42 Aligned Residues 260 % Identity 17% Template c3mf2B_ PDB info PDB header:ligase Chain: B: PDB Molecule:bll0957 protein; PDBTitle: crystal structure of class ii aars homologue (bll0957) complexed with2 amp Resolution 2.15 Å

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		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	K	Q	L	D	L	Y	H	M	Q	E	E	A	P	G	M	V	F	W	H	N	D	G	W	T	I	F	R	E	L	E	V	F	V	R	S	K	L	K	E	Y	Q	Y	Q	E	V	K	G	P	F	M	M	D	R	V	L	W	E	K	T	G	H	W	D	N	Y	K	D	A	M	F	T	T	S	S	E	N	R	E
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence		L	D	H	L	A	D	K	L	F	H	S	M	G	S	D	G	V	Y	A	R	T	A	L	Y	E	S	I	V	E	R	L	A	A	L	I	T	.	S	H	R	E	A	G	T	E	A	L	R	F	P	P	V	M	S	R	A	Q	L	E	K	S	G	Y	L	K	S	F	P	N	L	L	G	C	V	C	G	L	H	G	T
Template Known Secondary structure		T	G	G	G											T	T																					.		T			T	T								S										T	T						T	T	T									S
Template Predicted Secondary structure																																						.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
																											327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	C	I	K	P	M	N	C	P	G	H	V	Q	I	F	N	Q	G	L	K	S	Y	R	D	L	P	L	R	M	A	E	F	G	S	C	H	R	N	E	P	S	G	S	L	H	G	L	M	R	V	R	G	F	T	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																							.	.	.
Template Conservation																																													.																							.	.	.
Template Sequence		E	R	E	I	N	A	A	V	S	R	F	D	A	G	G	D	W	T	T	S	L	S	P	A	D	L	V	L	S	P	A	A	C	Y	P	V	Y	P	I	A	A	S	R	.	G	P	L	P	K	G	G	L	R	F	D	V	A	A	D	C	F	R	R	E	P	S	.	.	.	K	H	L	D	R	L	Q	S	F	R	M
Template Known Secondary structure														T	T	S		G	G	G	G										S	S	S	S	T	T							T	T	.		S			T	T																	.	.	.	S	S	T	T	S		S
Template Predicted Secondary structure																																													.																							.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	A	H	I	F	C	T	E	E	Q	I	R	D	E	V	N	G	C	I	R	L	V	Y	D	M	Y	S	T	F	G	F	E	K	I	V	V	K	L	S	T	R	P	E	K	R	I	G	S	D	E	M	W	D	R	A	E	A	D	L	A	V	A	L	E	E	N	N	I	P	F	E	Y	Q	L	G	E	G	A	F
Query Conservation
Alig confidence																																			.										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	Y	V	C	I	G	T	P	D	D	V	S	D	F	R	E	R	W	M	V	R	A	Q	A	I	A	R	D	L	G	L	T	.	F	R	V	D	Y	A	S	D	P	.	.	F	F	G	R	V	G	Q	M	K	A	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	Q
Template Known Secondary structure																															T	T			.										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.																					.	230	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.		.	480	.	.	.	.		.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.		.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.							.																																	.
Query SS confidence																			.							.																																	.
Query Sequence		Y	G	P	K	I	E	F	T	L	Y	D	C	L	D	R	A	W	.	Q	C	G	T	V	Q	.	L	D	F	S	L	P	S	R	L	S	A	S	Y	V	G	E	D	N	E	R	K	V	P	V	M	I	H	R	A	I	L	G	.	S	M	E	R	F	I	G	I	L	T	E	E	F	A	G	F	F	P	T	W	L	A
Query Conservation																			.							.																																	.
Alig confidence																			.							.																		.	.	.	.	.	.	.									.
Template Conservation																																												.	.	.	.	.	.	.
Template Sequence		Q	Q	L	K	F	E	L	L	I	P	L	R	S	E	E	Q	P	T	A	C	M	S	F	N	Y	H	R	E	H	F	G	T	T	W	G	I	Q	D	A	N	G	E	.	.	.	.	.	.	.	P	A	H	T	G	C	V	A	F	G	M	D	R	L	A	V	A	M	F	H	T	H	G	T	D	L	S	A	W	P	A
Template Known Secondary structure		T	T	S								S	S		S	S	S											T	T							T		B		T	T	S	S	.	.	.	.	.	.	.	B																							S		G	G	G	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.								.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		539	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		305	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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