Job Description P0A8M3 Confidence 99.93% Date Thu Jan 5 11:08:11 GMT 2012 Rank 61 Aligned Residues 198 % Identity 17% Template c3kewA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dhha1 domain protein; PDBTitle: crystal structure of probable alanyl-trna-synthase from clostridium2 perfringens Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		P	V	I	T	L	P	D	G	S	Q	R	H	Y	D	H	A	V	S	P	M	D	V	A	L	D	I	G	P	G	L	A	K	A	C	I	A	G	R	V	N	G	E	L	V	D	A	.	C	D	L	I	E	N	D	A	Q	L	S	I	I	T	A	K	D	E	E	G	L	E	I	I	R	H	S	C	A	H	L	L	G
Query Conservation																																																.
Alig confidence							.																				.	.	.																			.
Template Conservation							.																				.	.	.
Template Sequence		F	H	V	L	L	.	D	Q	T	A	F	F	P	G	G	G	G	Q	M	G	D	L	G	L	I	.	.	.	D	G	I	K	V	L	D	V	Y	E	E	E	G	K	V	Y	H	V	L	E	K	E	P	K	K	L	K	N	L	Q	C	E	L	D	W	E	R	R	F	D	G	M	Q	Q	H	L	G	Q	H	L	L	S
Template Known Secondary structure							.	S								B	T	T	B								.	.	.	T	T										T	T							S	S						S	S
Template Predicted Secondary structure							.																				.	.	.
Template SS confidence
		28	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	I	K	Q	L	W	P	H	T	K	M	A	I	G	P	V	I	D	N	G	F	Y	Y	D	V	D	L	D	R	T	L	T	Q	E	D	V	E	A	L	E	K	R	M	H	E	L	A	E	K	N	Y	D	V	I	K	K	K	V	S	W	H	E	A	R	E	T	F	A	N	R	G	E	S	Y	K	V	S	I	L
Query Conservation
Alig confidence										.																					.	.																																												.	.	.	.	.	.
Template Conservation										.																					.	.																																												.	.	.	.	.	.
Template Sequence		G	C	F	Y	D	L	F	G	.	A	N	T	C	G	F	H	L	G	K	E	I	S	T	V	D	I	V	G	F	.	.	L	D	E	K	T	I	R	E	A	E	K	E	A	N	R	L	I	F	E	N	L	E	V	K	S	Y	A	P	S	K	K	E	L	K	K	V	K	T	R	R	A	L	P	.	.	.	.	.	.
Template Known Secondary structure										.										S	S								S		.	.																				T		B								T	T	T	T	T	T				S	S				.	.	.	.	.	.
Template Predicted Secondary structure										.																					.	.																																												.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		D	E	N	I	A	H	D	D	K	P	G	L	Y	F	H	E	E	Y	.	V	D	M	C	R	G	P	H	V	P	N	M	R	F	C	H	H	F	K	L	M	K	T	A	G	A	Y	W	R	G	D	S	N	N	K	M	L	Q	R	I	Y	G	T	A	W	A
Query Conservation																				.
Alig confidence		.	.	.	.															.																									.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																								.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	K	T	D	E	E	I	R	I	V	E	I	V	G	L	D	L	N	A	C	C	G	V	H	P	R	N	T	R	D	L	Q	V	I	K	I	R	R	W	E	.	.	.	.	.	.	.	.	K	H	K	N	A	T	R	I	E	Y	V	A	G	N
Template Known Secondary structure		.	.	.	.			S	S								T	T	T							S				S	B	S	G	G	G										.	.	.	.	.	.	.	.			T	T									G	G
Template Predicted Secondary structure		.	.	.	.																																								.	.	.	.	.	.	.	.
Template SS confidence
						175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.									.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions