Job Description P0A8M3 Confidence 97.47% Date Thu Jan 5 11:08:11 GMT 2012 Rank 111 Aligned Residues 135 % Identity 14% Template c3cmqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phenylalanyl-trna synthetase, mitochondrial; PDBTitle: crystal structure of human mitochondrial phenylalanine trna2 synthetase Resolution 2.20 Å

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		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.												.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	L	E	V	F	V	R	S	K	L	K	E	Y	Q	Y	Q	E	V	K	G	P	F	M	M	D	R	V	L	W	E	K	T	G	H	W	D	N	Y	K	D	A	M	F	T	T	S	S	E	.	.	.	.	.	.	.	.	.	.	.	N	R	E	Y	C	I	K	P	M	N	C	P	G	H	V	Q	I	F	N	Q
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	L	I	K	E	R	V	K	E	H	F	Y	K	Q	Y	V	G	R	F	G	T	P	L	F	S	V	Y	D	N	L	S	P	V	V	T	T	W	Q	N	F	D	S	L	L	I	P	A	D	H	P	S	R	K	K	G	D	N	Y	Y	L	N	R	T	H	M	L	R	A	H	T	S	A	H	Q	W	D	L	L	H	A
Template Known Secondary structure																				S	S	S											S								T	G	G	G	T			T	T		G	G	G		G	G	G	S		B	S	S	S	S					S	S	G	G	G	G							T
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.																																.	.	390	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	K	S	Y	R	D	L	P	L	R	M	A	E	F	G	S	C	H	R	N	E	P	S	G	S	L	H	G	L	M	R	V	R	G	F	T	Q	D	D	A	H	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	T	E	E	Q
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.																		.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		G	L	D	.	.	.	.	.	.	.	A	F	L	V	V	G	D	V	Y	R	R	D	Q	I	D	S	Q	.	.	.	.	H	Y	P	I	F	H	Q	L	E	A	V	R	L	F	S	K	H	E	L	F	A	G	I	K	D	G	E	S	L	Q	L	F	E	Q	S	S	R	S	A	H	K	Q	E	T	H	T	M	E	A
Template Known Secondary structure		T		S	.	.	.	.	.	.	.															B	T	T	.	.	.	.	B		S																	T	T	T	S	T	T	G	G	G			S	B							S	S			T	T	B
Template Predicted Secondary structure					.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
		131	.	.								.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	D	E	V	N	G	C	I	R	L	V	Y	D	M	Y	S	T	F	G	F	E	K	I	V	V	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	L	V	E	F	D	L	K	Q	T	L	T	R	L	M	A	H	L	F	G	D	E	L	E	I	R	W
Template Known Secondary structure																							T	T
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions