Job Description P0A8M3 Confidence 99.96% Date Thu Jan 5 11:08:11 GMT 2012 Rank 53 Aligned Residues 204 % Identity 14% Template c2zzfA_ PDB info PDB header:ligase Chain: A: PDB Molecule:alanyl-trna synthetase; PDBTitle: crystal structure of alanyl-trna synthetase without2 oligomerization domain Resolution 2.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.														.	.	.
Query SS confidence																																			.														.	.	.
Query Sequence		I	T	L	P	D	G	S	Q	R	H	Y	D	H	A	V	S	P	M	D	V	A	L	D	I	G	P	G	L	A	K	A	C	I	.	A	G	R	V	N	G	E	L	V	D	A	C	D	.	.	.	L	I	E	N	D	A	Q	L	S	I	I	T	A	K	D	E	E	G	L	E	I	I	R	H	S	C	A	H	L	L
Query Conservation																																			.														.	.	.
Alig confidence					.																														.														.	.	.
Template Conservation					.
Template Sequence		V	I	L	.	D	A	T	A	F	Y	P	E	G	G	G	Q	P	Y	D	T	G	V	L	I	V	N	G	R	E	V	K	V	T	N	V	Q	K	V	G	K	V	I	I	H	K	V	E	D	P	G	A	F	K	E	G	M	I	V	H	G	K	I	D	W	K	R	R	I	Q	H	M	R	H	H	T	G	T	H	V	L
Template Known Secondary structure					.	S							S	B	T	T	B									S	S	S												T	T							S		G	G	G			T	T
Template Predicted Secondary structure					.
Template SS confidence
		541	.	.		.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		G	H	A	I	K	Q	L	W	P	H	T	K	M	A	I	G	P	V	I	D	.	N	G	F	Y	Y	D	V	D	L	D	R	T	L	T	Q	E	D	V	E	A	L	E	K	R	M	H	E	L	A	E	K	N	Y	D	V	I	K	K	K	V	S	W	H	E	A	R	E	T	F	A	N	R	G	E	S	Y	K	V	S
Query Conservation																						.
Alig confidence																						.																																																.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.
Template Sequence		M	G	A	L	V	R	V	L	G	R	H	V	W	Q	A	G	S	Q	L	T	T	D	W	A	R	L	D	I	S	H	Y	K	R	I	S	E	E	E	L	K	E	I	E	M	L	A	N	R	I	V	M	E	D	R	K	V	T	W	E	W	L	P	R	T	T	A	E	Q	.	.	.	.	.	.	.	K	Y	G	F	R
Template Known Secondary structure											T	T										S	S									S	S																					T		B														.	.	.	.	.	.	.				G	G
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Template SS confidence
		620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.								.	.	690	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		I	L	D	E	N	I	A	H	D	D	K	P	G	L	Y	F	H	E	E	Y	.	V	D	M	C	R	G	P	H	V	P	N	M	R	F	C	H	H	F	K	L	M	K	T	A	G	A	Y	W	R	G	D	S	N	N	K	M	L	Q	R	I	Y	G	T	A
Query Conservation																						.
Alig confidence																						.																								.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.
Template Sequence		L	Y	Q	G	G	V	V	P	G	R	E	I	R	V	V	K	I	E	D	W	D	V	Q	A	C	G	G	T	H	L	P	S	T	G	L	V	G	P	I	K	I	L	R	T	.	.	.	.	.	.	.	E	R	I	Q	D	G	V	E	R	I	I	F	A	C
Template Known Secondary structure		G		T	T	S				S	S								T	T	T							S				S	B	S	G	G	G									.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.
Template SS confidence
		693	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.								.	.	.	740	.	.	.	.	.	.	.	.	.	750

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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