Job Description P0A8M3 Confidence 99.96% Date Thu Jan 5 11:08:11 GMT 2012 Rank 52 Aligned Residues 204 % Identity 17% Template c2ztgA_ PDB info PDB header:ligase Chain: A: PDB Molecule:alanyl-trna synthetase; PDBTitle: crystal structure of archaeoglobus fulgidus alanyl-trna2 synthetase lacking the c-terminal dimerization domain in3 complex with ala-sa Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																			.												.	.
Query SS confidence																																			.												.	.
Query Sequence		I	T	L	P	D	G	S	Q	R	H	Y	D	H	A	V	S	P	M	D	V	A	L	D	I	G	P	G	L	A	K	A	C	I	.	A	G	R	V	N	G	E	L	V	D	A	.	.	C	D	L	I	E	N	D	A	Q	L	S	I	I	T	A	K	D	E	E	G	L	E	I	I	R	H	S	C	A	H	L	L	G
Query Conservation																																			.												.	.
Alig confidence					.																														.												.	.
Template Conservation					.
Template Sequence		V	I	L	.	N	R	S	A	F	Y	P	E	S	G	G	Q	D	N	D	V	G	Y	L	I	A	N	G	G	K	F	E	V	V	D	V	L	E	A	D	G	V	V	L	H	V	V	K	G	A	K	P	E	V	G	T	K	V	K	G	V	I	D	S	D	V	R	W	R	H	X	R	H	H	S	A	T	H	V	L	L
Template Known Secondary structure					.	S							S	B	T	T	B										T	T												T	T								S	S				T	T
Template Predicted Secondary structure					.
Template SS confidence
		529	530	.		.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		H	A	I	K	Q	L	W	P	H	T	K	M	A	I	G	P	V	I	D	.	N	G	F	Y	Y	D	V	D	L	D	R	T	L	T	Q	E	D	V	E	A	L	E	K	R	M	H	E	L	A	E	K	N	Y	D	V	I	K	K	K	V	S	W	H	E	A	R	E	T	F	A	N	R	G	E	S	Y	K	V	S	I
Query Conservation																					.
Alig confidence																					.																																																			.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.
Template Sequence		Y	S	L	Q	K	V	L	G	N	H	V	W	Q	A	G	A	R	K	E	F	S	K	A	R	L	D	V	T	H	F	R	R	P	S	E	E	E	I	K	E	I	E	X	L	A	N	R	E	I	L	A	N	K	P	I	K	W	E	W	X	D	R	I	E	A	E	R	K	F	G	.	.	.	.	.	.	.	F	R	L
Template Known Secondary structure										T	T								S			S	S								S	S																				T	T		B																	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Template SS confidence
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.								.	.	680
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	E	N	I	A	H	D	D	K	P	G	L	Y	F	H	E	E	Y	V	D	M	C	R	G	P	H	V	P	N	M	R	F	C	H	H	F	K	L	M	K	T	A	G	A	Y	W	R	G	D	S	N	N	K	M	L	Q	R	I	Y	G	T	A
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.
Template Sequence		Y	Q	G	G	V	P	P	G	R	K	I	R	V	V	Q	V	G	D	D	V	Q	A	C	G	G	T	H	C	R	S	T	G	E	I	G	X	L	K	I	L	K	V	.	.	.	.	.	.	.	E	S	I	Q	D	G	V	I	R	F	E	F	A	A
Template Known Secondary structure		G	T	T					S	S								T	T							S				S	B	G	G	G	G									.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.
Template SS confidence
		681	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.								.	.	.	.	.	.	.	730	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions