Job Description P0A8M3 Confidence 99.97% Date Thu Jan 5 11:08:11 GMT 2012 Rank 47 Aligned Residues 183 % Identity 17% Template c2zimA_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyrrolysyl-trna synthetase; PDBTitle: pyrrolysyl-trna synthetase bound to adenylated pyrrolysine and2 pyrophosphate Resolution 2.10 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	Q	R	I	Y	G	T	A	W	A	D	K	K	A	L	N	A	Y	L	Q	R	L	E	E	A	A	K	R	D	H	R	K	I	G	K	Q	L	D	L	Y	H	M	Q	E	E	A	P	G	M	V	F	W	H	N	D	G	W	T	I	F	R	E	L	E	V	F	V	R	S	K	L	K	E	Y	Q	Y	Q	E	V
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	D	R	L	E	V	L	L	N	P	K	D	E	S	G	K	P	F	R	E	L	E	S	E	L	L	S	R	R	K	K	D	L	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	A	E	E	R	E	N	Y	L	G	K	L	E	R	E	I	T	R	F	F	V	D	R	G	F	L	E	I
Template Known Secondary structure												T	T					S																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T																			T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.																230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	P	F	M	M	D	R	V	L	W	E	K	T	G	H	W	D	N	Y	K	D	A	M	F	T	T	S	S	E	N	R	E	Y	C	I	K	P	M	N	C	P	G	H	V	Q	I	F	N	Q	G	L	K	S	Y	R	D	L	P	L	R	M	A	E	F	G	S	C	H	R	N	E	P	S	G	S	L	H	G	L
Query Conservation
Alig confidence																												.	.	.	.																												.																				.	.	.
Template Conservation																												.	.	.	.																												.																				.	.	.
Template Sequence		K	S	P	I	L	I	P	L	E	Y	I	E	R	M	G	I	D	E	L	S	K	Q	I	F	R	V	.	.	.	.	D	K	N	F	C	L	R	P	M	L	A	P	N	L	Y	N	Y	L	R	K	L	D	R	A	L	P	D	.	P	I	K	I	F	E	I	G	P	C	Y	R	K	E	S	D	G	K	E	.	.	.
Template Known Secondary structure					S				T						T	T					G	G	G					.	.	.	.	T	T	T					S		S												T	T	T	S		S	.	S														S			S	S	.	.	.
Template Predicted Secondary structure																												.	.	.	.																												.																				.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	V	R	G	F	T	Q	D	D	A	H	I	F	C	T	E	E	Q	I	R	D	E	V	N	G	C	I	R	L	V	Y	D	M	Y	S	T	F	G	F	E	K	I	V	V	K	L	S	T	R	P
Query Conservation
Alig confidence		.																						.	.	.	.
Template Conservation		.																						.	.	.	.
Template Sequence		.	H	L	E	E	F	T	M	L	N	F	C	Q	M	G	S	G	C	T	R	E	N	.	.	.	.	L	E	S	I	I	T	D	F	L	N	H	L	G	I	D	F	K	I	V	G	D	S	C	M	V
Template Known Secondary structure		.			S											S	T	T						.	.	.	.													T											T	T
Template Predicted Secondary structure		.																						.	.	.	.
Template SS confidence
			338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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