 |
Job Description | P0A8M3 | Confidence | 21.31% | Date | Thu Jan 5 11:08:11 GMT 2012 |
Rank | 182 | Aligned Residues | 113 |
% Identity | 17% | Template | c2vx6A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:cellvibrio japonicus mannanase cjman26c; |
PDBTitle: cellvibrio japonicus mannanase cjman26c gal1man4-bound form
|
Resolution | 1.57 Å |
|
 |
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | F | H | E | E | Y | V | D | M | C | R | G | P | H | V | P | N | M | R | F | C | H | H | F | K | L | M | K | T | A | G | A | Y | W | R | G | D | S | N | N | K | M | L | Q | R | I | Y | G | T | A | W | A | D | K | K | A | L | N | A | Y | L | Q | R | L | E | E | A | A | K | R | D | H | R | K | I | G | K | Q | L | D |
Query Conservation |   |
|   |   |
|   |   |   |
|
|
|   |
|
|
|
|   |   |
|
|   |
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|   |
|
|
|   |   |   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |
|
|   |   |
|   |   |
|   |
|   |   | . |   |   |
|   |   |   |
|
|
Template Sequence |   |
Y | S | R | G | G | V | I | T | I | S | W | H | V | F | N | P | V | S | G | G | . |
N | S | W | D | K | T | P | A | V | H | E | L | I | P | G | G | A | R | H | A | T | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | A | Y | L | D | T | F | V | A | F | N | E | G | L | A | D | V | D | . |
A | Q | G | N | K | H | Y | P |
Template Known Secondary structure |   |
 |  | T | T |
|  |  |  |  |  |
|
|
|
|
| T | T | T | S |
| . |
| T | T |
|
|
|
|
|  |  |  |  | S | T | T | S | T | T |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
| . | T | T | S |
|  |  |
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
. | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
. | . | . | . | . | 210 | . | . |
  |
  |   |
253 | . | . | . | . | . | |
|
. | 260 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 270 | . | . | |
. | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |
|
| . | . |
|
|
|
|
|
|  |  | . | . | . | . | . | . |
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Y | H | M | Q | E | . |
. |
E | A | P | G | M | V | F | W | . |
. |
. |
. |
. |
. |
H | N | D | G | W | T | . |
I | F | R | E | L | E | V | F | V | R | S | K | L | K | E | Y | Q | Y | Q | E | V | K | G | P | F |
Query Conservation |   |
|
|   |   |   |   | . | . |   |   |
|
|   |   |   |   | . | . | . | . | . | . |
|
|   |
|   |   | . |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |
|
|   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |
|   |
|   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|   |
Template Sequence |   |
P | I | I | F | R | P | W | H | E | H | N | G | D | W | F | W | W | G | K | G | H | A | S | E | Q | D | Y | I | A | L | W | R | F | T | V | H | Y | L | R | D | E | K | K | L | R | N | L | I | Y | A | Y | S | P | D |
Template Known Secondary structure |   |
|  |  |  |  |
| S |
| S | T | T | S | S | S | S | T | T | S | B | T | T | B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
| S |  |  |  |  |  |
|
| B |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|