Job Description P0A8M3 Confidence 99.14% Date Thu Jan 5 11:08:11 GMT 2012 Rank 90 Aligned Residues 162 % Identity 11% Template c2rhqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phenylalanyl-trna synthetase alpha chain; PDBTitle: phers from staphylococcus haemolyticus- rational protein2 engineering and inhibitor studies Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.					.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		K	I	G	K	Q	L	D	L	Y	H	M	Q	E	E	A	P	G	M	V	F	W	H	N	D	G	W	T	I	F	R	E	L	E	V	F	V	R	S	K	L	K	E	Y	Q	Y	Q	E	V	K	G	P	F	M	M	D	R	.	.	.	.	V	L	W	E	K	T	G	H	W	D	N	Y	K	D	A	M	F	T	T	S
Query Conservation																																																										.	.	.	.
Alig confidence																						.																																				.	.	.	.								.	.
Template Conservation																						.																																															.	.
Template Sequence		K	L	N	Q	Q	L	A	E	E	T	I	D	V	T	L	P	S	R	Q	I	.	S	I	G	S	K	H	P	L	T	R	T	V	E	E	I	E	D	L	F	L	G	L	G	Y	E	I	V	D	G	Y	E	V	E	Q	D	Y	Y	N	F	E	A	L	N	L	P	K	.	.	S	H	P	A	R	D	M	Q	D	S	F
Template Known Secondary structure							T	T	T	T				T	T	S						.																					T	T	T								S								T	G	G	G	T			T	.	.	T		G	G	G		T	T	T	S
Template Predicted Secondary structure																						.																																															.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	N	R	E	Y	C	I	K	P	M	N	C	P	G	H	V	Q	I	F	N	Q	G	L	K	S	Y	R	D	L	P	L	R	M	A	E	F	G	S	C	H	R	N	E	P	S	G	S	L	H	G	L	M	R	V	R	G	F	T	Q	D	D	A	H	I	F	C	T	E	E	Q	I	R	D	E	V	N	G	C	I
Query Conservation
Alig confidence																													.	.	.																				.	.	.	.																						.	.	.	.
Template Conservation																													.	.	.																				.	.	.	.																						.	.	.	.
Template Sequence		Y	I	T	D	E	I	L	M	R	T	H	T	S	P	V	Q	A	R	T	M	E	K	R	N	G	Q	G	.	.	.	P	V	K	I	I	C	P	G	K	V	Y	R	R	D	S	D	D	A	T	.	.	.	.	H	S	H	Q	F	T	Q	I	E	G	L	V	V	D	K	N	I	K	M	S	D	.	.	.	.	L	K
Template Known Secondary structure		B	S	S	S	S					S	S	S											T	T	T		S	.	.	.																	B	T	T	.	.	.	.	B		S												S	S						.	.	.	.
Template Predicted Secondary structure																													.	.	.																				.	.	.	.																						.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	V	Y	D	M	Y	S	T	F	G	F	E	K	I	V	V	K	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	L	E	L	V	A	K	K	L	F	G	A	D	R	E	I	R	L	R
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions