Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8M3
Confidence99.10%DateThu Jan 5 11:08:11 GMT 2012
Rank91Aligned Residues65
% Identity22%Templatec2kmmA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:guanosine-3',5'-bis(diphosphate) 3'- PDBTitle: solution nmr structure of the tgs domain of pg1808 from2 porphyromonas gingivalis. northeast structural genomics3 consortium target pgr122a (418-481)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60......
Predicted Secondary structure 





























Query SS confidence 
































































Query Sequence  PVITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEE
Query Conservation    
 



       
 
  


           
 
 


 
 

   
  
  
  
      
Alig confidence 
































































Template Conservation 
 
 



    

 


  
 
  

  

     




  
 
   
  

 




    
Template Sequence  VMVFTPKGEIKRLPQGATALDFAYSLHSDLGDHCIGAKVNHKLVPLSYVLNSGDQVEVLSSKSLE
Template Known Secondary structure 
TT


TT
B
STTT

TT
B

SSSB




Template Predicted Secondary structure 






























Template SS confidence 
































































   419420.........430.........440.........450.........460.........470.........480...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions