Job Description P0A8M3 Confidence 99.17% Date Thu Jan 5 11:08:11 GMT 2012 Rank 89 Aligned Residues 188 % Identity 16% Template c2du4B_ PDB info PDB header:ligase/rna Chain: B: PDB Molecule:o-phosphoseryl-trna synthetase; PDBTitle: crystal structure of archaeoglobus fulgidus o-phosphoseryl-2 trna synthetase complexed with trnacys Resolution 2.80 Å

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		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	D	K	K	A	L	N	A	Y	L	Q	R	L	E	E	A	A	K	R	D	H	R	K	I	G	K	Q	L	D	L	Y	H	M	Q	E	E	A	P	G	M	V	F	W	H	N	D	G	W	T	I	F	R	E	L	E	V	F	V	R	S	K	L	K	E	Y	Q	Y	Q	E	V	K	G	P	F	M	M	D	R	V
Query Conservation
Alig confidence																						.	.	.	.																					.
Template Conservation																						.	.	.	.																					.
Template Sequence		F	D	P	Q	K	Y	R	E	L	A	E	K	D	F	E	A	A	W	K	A	.	.	.	.	G	K	E	I	L	A	E	R	S	P	N	E	L	Y	P	R	V	G	F	S	.	F	G	K	E	H	P	L	F	A	T	I	Q	R	L	R	E	A	Y	L	S	I	G	F	S	E	V	V	N	P	L	I	V	E	D	V
Template Known Secondary structure													S									.	.	.	.	G	G	G	G	S					G	G	G	S	T	T	S	S				.																				T	T	T												T
Template Predicted Secondary structure																						.	.	.	.																					.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		303	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.									.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.
Predicted Secondary structure							.	.																			.	.	.	.	.	.	.	.																																									.
Query SS confidence							.	.																			.	.	.	.	.	.	.	.																																									.
Query Sequence		L	W	E	K	T	.	.	G	H	W	D	N	Y	K	D	A	M	F	T	T	S	S	E	N	R	.	.	.	.	.	.	.	.	E	Y	C	I	K	P	M	N	C	P	G	H	V	Q	I	F	N	Q	G	L	K	S	Y	R	D	L	P	L	R	M	A	E	F	G	S	C	H	R	N	E	.	P	S	G	S	L	H
Query Conservation							.	.																			.	.	.	.	.	.	.	.																																									.
Alig confidence							.	.																			.	.	.	.	.	.	.	.																		.																							.						.
Template Conservation																																																				.																													.
Template Sequence		H	V	K	K	Q	F	G	R	E	A	L	A	V	L	D	R	C	F	Y	L	A	T	L	P	K	P	N	L	K	P	I	S	S	T	L	T	L	R	S	H	M	T	T	G	W	F	I	T	L	S	.	H	I	A	D	K	L	P	L	P	I	K	L	F	S	I	D	R	C	F	R	R	E	Q	G	E	D	A	T	.
Template Known Secondary structure								T	T	T					G	G	G	S																						S	S	T									T	.	T	T	T	T	T	S		S															T	T		T	T	T	.
Template Predicted Secondary structure																																																				.																													.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.							.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		G	L	M	R	V	R	G	F	T	Q	D	D	A	H	I	F	C	T	E	E	Q	I	R	D	E	V	N	G	C	I	R	L	V	Y	D	M	Y	S	T	F	G	F	E	K	I	V	V	K	L	S	.	.	.	.	.	.	T	R	P
Query Conservation																																																				.	.	.	.	.	.
Alig confidence		.	.	.																						.	.	.	.																							.	.	.	.	.	.
Template Conservation		.	.	.																						.	.	.	.
Template Sequence		.	.	.	R	L	Y	T	Y	F	S	A	S	C	V	L	V	D	E	E	L	S	V	D	D	.	.	.	.	G	K	A	V	A	E	A	L	L	R	Q	F	G	F	E	N	F	R	F	R	K	D	E	K	R	S	K	Y	Y	I	P
Template Known Secondary structure		.	.	.			S												S	S						.	.	.	.											T	T	T										T	T			T	T	B		T
Template Predicted Secondary structure		.	.	.																						.	.	.	.
Template SS confidence
					225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.					.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions