Job Description P0ADF6 Confidence 100.00% Date Thu Jan 5 11:20:54 GMT 2012 Rank 2 Aligned Residues 330 % Identity 65% Template d2gp4a2 SCOP info IlvD/EDD N-terminal domain-like IlvD/EDD N-terminal domain-like lvD/EDD N-terminal domain-like Resolution 2.49

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	Q	L	L	R	V	T	N	R	I	I	E	R	S	R	E	T	R	S	A	Y	L	A	R	I	E	Q	A	K	T	S	T	V	H	R	S	Q	L	A	C	G	N	L	A	H	G	F	A	A	C	Q	P	E	D	K	A	S	L	K	S	M	L	R	N	N	I	A	I	I	T	S	Y	N	D	M	L	S	A	H
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	S	V	V	Q	S	V	T	D	R	I	I	A	R	S	K	A	S	R	E	A	Y	L	A	A	L	N	D	A	R	N	H	L	L	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																																T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	Y	E	H	Y	P	E	I	I	R	K	A	L	H	E	A	N	A	V	G	Q	V	A	G	G	V	P	A	M	C	D	G	V	T	Q	G	Q	D	G	M	E	L	S	L	L	S	R	E	V	I	A	M	S	A	A	V	G	L	S	H	N	M	F	D	G	A	L	F	L	G	V	C	D	K	I	V	P	G	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.								.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.								.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	G	S	V	.	A	Q	V	A	G	V	P	.	.	C	D	G	V	T	Q	G	Q	P	G	X	E	L	S	L	L	S	R	E	V	I	A	X	A	T	A	V	G	L	S	H	N	X	F	D	G	A	L	L	L	G	I	C	D	K	I	V	P	G	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.						B		.	.							S	S	S	G	G	G	G																	T	T				S								S	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.								.	.
Template SS confidence
																	97	.	.	100	.		.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		162	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		T	M	A	A	L	.	S	F	G	H	L	P	A	V	F	V	P	S	G	P	M	A	S	G	L	P	N	K	E	K	V	R	I	R	Q	L	Y	A	E	G	K	V	D	R	M	A	L	L	E	S	E	A	A	S	Y	H	A	P	G	T	C	T	F	Y	G	T	A	N	T	N	Q	M	V	V	E	F	M	G	M	Q
Query Conservation							.
Alig confidence							.			.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Sequence		L	I	G	A	L	S	F	G	.	H	L	P	X	L	F	V	P	A	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	V	D	R	A	Q	L	L	E	A	E	A	Q	S	Y	H	S	A	G	T	C	T	F	Y	G	Q	.	.	.	.	.	L	X	L	E	V	X	G	L	Q
Template Known Secondary structure							T	T	T	.	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T								T	T	S	S														.	.	.	.	.						T	T		S
Template Predicted Secondary structure										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180																				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	G	S	S	F	V	H	P	D	S	P	L	R	D	A	L	T	A	A	A	A	R	Q	V	T	R	M	T	G	N	G	N	E	W	M	P	I	G	K	M	I	D	E	K	V	V	V	N	G	I	V	A	L	L	A	T	G	G	S	T	N	H	T	M	H	L	V	A	M	A	R	A	A	G	I	Q	I	N	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	G	S	S	F	V	N	P	D	D	P	L	R	E	A	L	N	K	X	A	A	K	Q	V	C	R	L	T	E	L	G	T	Q	Y	S	P	I	G	E	V	V	N	E	K	S	I	V	N	G	I	V	A	L	L	A	T	G	G	S	T	N	L	T	X	H	I	V	A	A	A	R	A	A	G	I	I	V	N	W
Template Known Secondary structure			T	T	G	G	G	S		T	T																		T	S	T	T	S	S	S								S	S														T	T			T													T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	F	S	D	L	S	D	V	V	P	L	M	A	R	L	Y	P	N	G	P	A	D	I	N	H	F	Q	A	A	G	G	V	P	V	L	V	R	E	L	L	K	A	G	L	L	H	E	D	V	N	T	V	A	G	F	G	L	S	R	Y	T	L	E	P	W	L	N	N	G	E	L	D	W	R	E	G	A	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	D	F	S	E	L	S	D	A	V	P	L	L	A	R	V	Y	P	N	G	H	A	D	I	N	H	F	H	A	A	G	G	X	A	F	L	I	K	E	L	L	D	A	G	L	L	H	E	D	V	N	T	V	A	G	Y	G	L	R	R	Y	T	Q	E	P	K	L	L	D	G	E	L	R	W	V	D	G	P	T	V
Template Known Secondary structure									T	T			B		B			G	G	G	S	S										T													T		S							T	T				G	G	G	G	G							T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	D	S	N	V	I	A	S	F	E	Q	P	F	S	H	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	D	T	E	V	L	T	S	V	A	T	P	F	Q	N	N	G
Template Known Secondary structure			S		T	T	T	B			S	S	S		S	B	S
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions