 |
Job Description | P0ADF6 | Confidence | 28.45% | Date | Thu Jan 5 11:20:54 GMT 2012 |
Rank | 40 | Aligned Residues | 66 |
% Identity | 20% | Template | d1od5a1 |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| Germin/Seed storage 7S protein
|
Resolution | 2.1 |
|
 |
  |   |
407 | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | |
|
|
430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | S | F | E | Q | P | F | S | H | H | G | G | T | K | V | L | S | G | N | L | G | R | . |
. |
. |
A | V | M | K | T | S | A | V | P | V | E | N | Q | V | I | E | A | P | A | V | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | E | S | Q | H | D | V | M | P | A | F | E | A | G | L | L | D | R | D | C | V | V | V |
Query Conservation |   |
|   |
|   |
|   |
|   |   |   |   |
|
|
|   |
|
|   |
|
|
|
|
| . | . | . |
|
|
|
|   |
|
|
|   |   |
|   |   |   |   |   |
|   |
|   |
| . | . | . | . | . | . | . | . | . | . |
|   |
|
|
|
|
|   |   |
|
|   |   |
|   |
|   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |
|   |   |
|   |
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|   |
|
|   |   |
|   |
|   |
|   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . |   |
|   |   |
|
|
|   |   |
Template Sequence |   |
T | W | N | S | Q | H | P | E | L | Q | C | A | G | V | T | V | S | K | R | T | L | N | R | N | G | L | H | L | P | S | Y | S | P | Y | P | Q | M | I | I | V | V | Q | G | K | G | A | I | G | F | A | F | P | G | C | P | E | T | F | E | K | P | Q | D | S | H | Q | K | I | R | . |
. |
H | F | N | E | G | D | V | L | V |
Template Known Secondary structure |   |
 |
|
| T | T | S |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
| T | T |
|
|
|
|  |  |  |
|
|  |  |  | S |
|  |  | . | . |  |  |  | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  | . | . |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
. | . | . | . | . | . | . | . | . |
  |
  |   |
474 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
V |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
I |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
125 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|