Job Description P75799 Confidence 99.87% Date Thu Jan 5 12:14:18 GMT 2012 Rank 2 Aligned Residues 235 % Identity 16% Template c2onkC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease PDBTitle: abc transporter modbc in complex with its binding protein2 moda Resolution 3.10 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	R	R	Q	H	M	A	M	T	A	A	L	F	V	I	L	L	I	V	V	A	I	F	A	R	W	I	A	P	Y	D	A	E	N	Y	F	D	Y	D	N	L	N	N	G	P	S	L	Q	H	W	F	G	V	D	S	L	G	R	D	I	F	S	R	V	L	V	G	A	Q	I	S	L	A	A	G	V	F	A	V
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	L	F	S	A	L	L	A	L	L	S	S	I	I	L	L	F	V	L	L	P	V	A	A	T	V	T	L	Q	L	F	N	F	D	E	F	L	K	A	A	S	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	W	K	V	V	L	T	T	Y	Y	A	A	L	I	S	T
Template Known Secondary structure																														T	T	T	T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.															160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	G	A	A	I	G	T	L	L	G	L	L	A	G	Y	Y	E	G	W	W	D	R	L	I	M	R	I	C	D	V	L	F	A	F	P	G	I	L	L	A	I	A	V	V	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	S	G	I	A	N	V	I	I	A	V	A	I	F	S	I	P	A
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	A	V	I	F	G	T	P	L	A	Y	I	L	A	R	K	S	F	P	G	K	S	V	V	E	G	I	V	D	L	P	V	V	I	P	H	T	V	A	G	I	A	L	L	V	V	F	G	S	S	G	L	I	G	S	F	S	P	L	K	F	V	D	A	L	P	G	I	V	V	A	M	L	F	V	S	V	P	I
Template Known Secondary structure																	S				S	S														S														S	T	T	S	T	T	T	T	T		S	S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	R	L	V	R	G	N	T	L	V	L	K	Q	Q	T	F	I	E	S	A	R	S	I	G	A	S	D	M	T	V	L	L	R	H	I	L	P	G	T	V	S	S	I	V	V	F	F	T	M	R	I	G	T	S	I	I	S	A	A	S	L	S	F	L	G	L	G	A	Q	P	P	T	P	E	W	G	A	M	L
Query Conservation
Alig confidence										.																																																											.	.	.	.
Template Conservation										.																																																											.	.	.	.
Template Sequence		Y	I	N	Q	A	K	E	G	.	F	A	S	V	D	V	R	L	E	H	V	A	R	T	L	G	S	S	P	L	R	V	F	F	T	V	S	L	P	L	S	V	R	H	I	V	A	G	A	I	M	S	W	A	R	G	I	S	E	F	G	A	V	V	V	I	A	Y	.	.	.	.	Y	P	M	I	A	P	T	L	I
Template Known Secondary structure										.				S											T	T										T																													T	T			.	.	.	.	S	S
Template Predicted Secondary structure										.																																																											.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	A	R	A	D	M	V	I	A	P	H	V	A	V	F	P	A	L	A	I	F	L	T	V	L	A	F	N	L	L	G	D	G	L
Query Conservation
Alig confidence												.	.
Template Conservation												.	.
Template Sequence		Y	E	R	Y	L	S	E	G	L	S	.	.	A	A	M	P	V	A	A	I	L	I	L	L	S	L	A	V	F	V	A	L	R	I	I
Template Known Secondary structure										G	G	.	.	G	T																					T
Template Predicted Secondary structure												.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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