Job Description P0A754 Confidence 99.30% Date Thu Jan 5 11:04:51 GMT 2012 Rank 44 Aligned Residues 115 % Identity 17% Template c3edoA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:putative trp repressor binding protein; PDBTitle: crystal structure of flavoprotein in complex with fmn2 (yp_193882.1) from lactobacillus acidophilus ncfm at 1.203 a resolution Resolution 1.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																		.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	I	I	Y	A	H	P	Y	P	H	H	S	H	A	N	K	R	M	L	E	Q	A	R	T	L	E	G	V	E	I	R	S	L	Y	Q	L	Y	P	D	F	N	I	D	I	A	A	E	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	S	R	A	D	L	I	V	W	Q	H	P
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.
Template Sequence		T	L	I	L	Y	Y	S	W	S	G	E	T	K	K	X	A	E	K	I	N	S	E	I	K	.	D	S	E	L	K	E	V	K	V	S	E	G	T	F	D	A	D	Y	K	T	S	D	I	A	L	D	Q	I	Q	G	N	K	D	F	P	E	I	Q	L	D	N	I	D	Y	N	N	Y	D	L	I	L	I	G	S	P
Template Known Secondary structure									S	S	S													S	T	.	T							B			T	T	S	S															T	T	S	S						B						G	G	G		S
Template Predicted Secondary structure																										.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	W	Y	S	I	P	P	L	L	K	L	W	I	D	K	V	F	S	H	G	W	A	Y	G	H	G	G	T	A	L	H	G	K	H	L	L	W	A	V	T	T	G	G	G	E	S	H	F	E	I	G	A	H	P	G	F	D	V	L	S	Q	P	L	Q	A	T	A	I	Y	C	G	L	N	W	L	P
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		V	W	S	G	Y	P	A	T	P	I	K	T	L	L	D	Q	X	.	.	.	.	.	.	.	.	.	.	.	.	K	N	Y	R	G	E	V	A	S	F	F	T	S	A	G	.	.	.	.	.	.	.	.	.	.	T	N	H	K	A	Y	V	S	H	F	N	E	W	A	D	.	.	G	L	N	V	I	G
Template Known Secondary structure				T	T				T									T	.	.	.	.	.	.	.	.	.	.	.	.	T	T			S									S	S	.	.	.	.	.	.	.	.	.	.														T	T	.	.	T	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.													.	.	.	.	.	.	.	.	110	.	.	.	.	.	.											.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions