Job Description P76270 Confidence 58.28% Date Thu Jan 5 12:21:25 GMT 2012 Rank 53 Aligned Residues 135 % Identity 11% Template c3mq0A_ PDB info PDB header:transcription repressor Chain: A: PDB Molecule:transcriptional repressor of the blcabc operon; PDBTitle: crystal structure of agobacterium tumefaciens repressor blcr Resolution 1.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		N	R	D	F	N	A	L	M	A	G	E	T	S	F	L	A	T	L	A	N	T	S	A	L	L	Y	E	R	L	T	D	I	N	W	A	G	F	Y	L	L	E	D	D	T	L	V	L	G	P	F	Q	G	K	I	A	C	V	R	I	P	V	G	R	G	V	C	G	T	A	V	A	R	N	Q	V	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																																																													.	.	.	.	.
Template Conservation
Template Sequence		S	L	R	W	A	N	G	F	L	S	H	L	D	I	V	S	T	F	N	D	H	L	A	Q	R	H	D	L	D	P	Y	T	V	T	L	T	V	R	E	G	G	E	V	V	Y	I	G	C	R	N	H	T	F	R	I	G	M	R	L	P	A	P	F	T	A	T	G	K	I	L	L	S	D	L	G	P	G	E	L	R
Template Known Secondary structure												T													T		G	G	G	T	T	S									T	T														T	T					T	T	T	S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
																																		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	I	E	D	V	H	V	F	D	G	H	I	A	C	D	A	A	S	N	S	E	I	V	L	P	L	V	.	V	K	N	Q	I	I	G	V	L	D	I	D	S	T	V	F	G	R	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.									.																		.
Template Conservation																																														.	.	.	.	.	.	.	.																											.
Template Sequence		M	L	F	S	Q	F	P	Q	P	L	T	S	R	S	V	A	G	L	S	Q	L	E	E	E	L	A	L	T	R	A	R	G	Y	S	I	D	D	G	Q	I	R	E	G	M	.	.	.	.	.	.	.	.	L	C	I	G	A	A	I	R	D	Y	S	G	A	A	S	A	G	I	A	I	S	L	I	R	S	E	.	A
Template Known Secondary structure					S	S					S	S	T	T	S			S															T	S					S	S	S	S	T	T		.	.	.	.	.	.	.	.										T	T	S												T	T	S	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.																											.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.									.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	E	D	E	Q	G	L	R	Q	L	V	A	Q	L	E	K	V	L	A	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	E	K	I	A	Y	L	G	E	E	L	R	T	T	A	N	A	L	S	E	K
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions