Job Description P76270 Confidence 99.54% Date Thu Jan 5 12:21:25 GMT 2012
Rank 35 Aligned Residues 141
% Identity 17% Template c3e98B_
PDB info
PDB header: unknown functionChain: B: PDB Molecule: gaf domain of unknown function;
PDBTitle: crystal structure of a gaf domain containing protein that belongs to2 pfam duf484 family (pa5279) from pseudomonas aeruginosa at 2.43 a3 resolution
Resolution 2.43 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
2 . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
N K T E F Y A D L N R D F N A L M A G E T S F L A T L A N T S A L L Y E R L T D I N W A G F Y L L E D D T L V L G P F Q G K I A C V R I P V G R G V C G T A V A
Query Conservation  
                                                                                                                                     
Alig confidence  
. .
Template Conservation  
                                                            .                                               .                          
Template Sequence  
R E N D R L F D K T R R L V L D L L D A T S L E D V V S T V E D S L R H E F .
Q V P Y V S L I L F S D S R S V S S A E A H Q A I G G .
L L S G K T V C G V L R P
Template Known Secondary structure  
T S T S . S T T . S S
Template Predicted Secondary structure  
. .
Template SS confidence  
   
77 . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . .
. . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 .
. . . . . . . . 150 . . . .
 
   
82 . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . .
. . . . 140 . . . . . . . . . 150 . . .
Predicted Secondary structure  
.
Query SS confidence  
.
Query Sequence  
R N Q V Q R I E D V H V F D G H I A C D A A S N S E I V L P L V V K N Q I I G V L D I D S T V F G R F T D E .
D E Q G L R Q L V A Q L E K V L A T
Query Conservation  
                                                                                  .              
Alig confidence  
. . . . . . . . . .
Template Conservation  
                            . . . . . . . .               .                                                
Template Sequence  
H E L A F L F G E S D R D E .
.
.
.
.
.
.
.
I G S A A V V S L S .
F Q G L H G V L A I G S P D P Q H Y K S S L G T L F L G Y V A E V L A R V L P R
Template Known Secondary structure  
T T . . . . . . . . S . S S S S S T T T T S S T T T T G G G
Template Predicted Secondary structure  
. . . . . . . . .
Template SS confidence  
   
161 . . . . . . . . 170 . . . .
. . . . . 180 . . . .
. . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]