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Job DescriptionP76270
Confidence99.54%DateThu Jan 5 12:21:25 GMT 2012
Rank35Aligned Residues141
% Identity17%Templatec3e98B_
PDB info PDB header:unknown functionChain: B: PDB Molecule:gaf domain of unknown function; PDBTitle: crystal structure of a gaf domain containing protein that belongs to2 pfam duf484 family (pa5279) from pseudomonas aeruginosa at 2.43 a3 resolution
Resolution2.43 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDINWAGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVA
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Template Sequence  RENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHEF. QVPYVSLILFSDSRSVSSAEAHQAIGG. LLSGKTVCGVLRP
Template Known Secondary structure  T

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Query Sequence  RNQVQRIEDVHVFDGHIACDAASNSEIVLPLVVKNQIIGVLDIDSTVFGRFTDE. DEQGLRQLVAQLEKVLAT
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Template Sequence  HELAFLFGESDRDE. . . . . . . . IGSAAVVSLS. FQGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPR
Template Known Secondary structure  TT........
S.SSSSSTTTTSSTTTTGGG
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   161........170.... .....180.... .....190.........200.........210.........220....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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