Job Description P76270 Confidence 23.00% Date Thu Jan 5 12:21:25 GMT 2012 Rank 64 Aligned Residues 140 % Identity 16% Template c2uv0G_ PDB info PDB header:transcription Chain: G: PDB Molecule:transcriptional activator protein lasr; PDBTitle: structure of the p. aeruginosa lasr ligand-binding domain2 bound to its autoinducer Resolution 1.8 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																												.	.	.	.	.	.													.	.	.	.
Query SS confidence																																												.	.	.	.	.	.													.	.	.	.
Query Sequence		N	R	D	F	N	A	L	M	A	G	E	T	S	F	L	A	T	L	A	N	T	S	A	L	L	Y	E	R	L	T	D	I	N	W	A	G	F	Y	L	L	E	D	.	.	.	.	.	.	D	T	L	V	L	G	P	F	Q	G	K	I	.	.	.	.	A	C	V	R	I	P	V	G	R	G	V	C	G	T	A	V
Query Conservation																																												.	.	.	.	.	.													.	.	.	.
Alig confidence																														.	.													.	.	.	.	.	.													.	.	.	.
Template Conservation																														.	.
Template Sequence		L	V	D	G	F	L	E	L	E	R	S	S	G	K	L	E	W	S	A	I	L	Q	K	X	A	S	D	L	.	.	G	F	S	K	I	L	F	G	L	L	P	K	D	S	Q	D	Y	E	N	A	F	I	V	G	N	Y	P	A	A	W	R	E	H	Y	D	R	A	G	Y	A	R	V	D	P	T	V	S	H	C	T
Template Known Secondary structure										T	T																			.	.	T											T	T				G	G	G	S						S											T	T	G	G	G	T
Template Predicted Secondary structure																														.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.							.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																			.	.	.	.	.	.																																			.	.
Query SS confidence																			.	.	.	.	.	.																																			.	.
Query Sequence		A	R	N	Q	V	Q	R	I	E	D	V	H	V	F	D	G	H	.	.	.	.	.	.	I	A	C	D	A	A	S	N	S	E	I	V	L	P	L	V	V	K	N	Q	I	I	G	V	L	D	I	D	S	T	V	F	G	R	.	.	F	T	D	E	D	E	Q	G	L	R	Q	L	V	A	Q	L	E	K	V	L	A
Query Conservation																			.	.	.	.	.	.																																			.	.
Alig confidence																			.	.	.	.	.	.																																			.	.
Template Conservation
Template Sequence		Q	S	V	L	P	I	F	W	E	P	S	I	Y	Q	T	R	K	Q	H	E	F	F	E	E	A	S	A	A	G	L	V	Y	G	L	T	X	P	L	H	G	A	R	G	E	L	G	A	L	S	L	S	V	E	A	E	N	R	A	E	A	N	R	F	X	E	S	V	L	P	T	L	W	X	L	K	D	Y	A	L	Q
Template Known Secondary structure				S	S						G	G	G			S													T	T		S										T	T	S												S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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