Job Description P76270 Confidence 99.45% Date Thu Jan 5 12:21:25 GMT 2012 Rank 36 Aligned Residues 148 % Identity 10% Template c2o9bA_ PDB info PDB header:transferase Chain: A: PDB Molecule:bacteriophytochrome; PDBTitle: crystal structure of bacteriophytochrome chromophore binding domain Resolution 2.15 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.								70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.
Query Sequence		A	D	L	N	R	D	F	N	A	L	M	A	G	E	T	S	F	L	A	T	L	A	N	T	S	A	L	L	Y	E	R	L	T	D	I	N	W	A	G	F	Y	L	L	E	D	D	T	L	V	L	G	P	F	Q	G	K	I	A	C	V	R	I	.	.	.	.	.	.	.	P	V	G	R	G	V	C	G	T	A	V
Query Conservation																																																																.	.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	H	A	L	R	N	A	M	F	A	L	E	S	A	P	N	L	R	A	L	A	E	V	A	T	Q	T	V	R	E	L	T	G	F	D	R	V	M	L	Y	K	F	A	P	D	A	T	G	E	V	I	A	E	A	R	R	E	G	L	H	A	F	L	G	H	R	F	P	A	S	D	I	P	A	Q	A	R	A	L	Y
Template Known Secondary structure																	S																			S									T	T	S											T	T	S				T	T					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																														.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	N	Q	V	Q	R	I	E	D	V	H	V	F	D	G	H	I	A	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	S	N	S	E	I	V	L	P	L	V	V	K	N	Q	I	I	G	V	L	D	I	D	S	T	V	F	G	R
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	H	L	L	R	L	T	A	D	T	R	A	A	A	V	P	L	D	P	V	L	N	P	Q	T	N	A	P	T	P	L	G	G	A	V	L	R	A	T	S	P	M	H	M	Q	Y	L	R	N	M	G	V	G	S	S	L	S	V	S	V	V	V	G	G	Q	L	W	G	L	I	A	C	H	H	Q	T	P	Y	V
Template Known Secondary structure		T	T	S						S		T	T								S	S			T	T	T	T						T	T		T	T	B													T	T		S										T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	D	E	D	E	Q	G	L	R	Q	L	V	A	Q	L	E	K	V	L	A	T	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	P	D	L	R	T	T	L	E	S	L	G	R	L	L	S	L	Q	V	Q	V	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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