Job Description P76270 Confidence 64.12% Date Thu Jan 5 12:21:25 GMT 2012 Rank 50 Aligned Residues 139 % Identity 16% Template c2o0yB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator rha1_ro069532 (iclr-family) from rhodococcus sp. Resolution 2.00 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.									.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.
Query Sequence		N	R	D	F	N	A	L	M	A	G	E	T	S	F	L	A	T	L	A	N	T	S	A	L	L	Y	E	R	L	T	D	I	N	W	A	G	F	Y	L	L	E	D	D	T	L	V	L	G	P	F	Q	G	K	I	.	.	.	.	.	.	.	.	A	C	V	R	I	P	V	G	R	G	V	C	G	T	A	V	A	R
Query Conservation																																																								.	.	.	.	.	.	.	.
Alig confidence																																.	.																							.	.	.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		X	L	R	W	V	R	L	A	G	R	T	W	A	P	P	E	E	V	V	D	I	X	R	Q	L	S	A	D	T	G	.	.	E	T	V	N	L	Y	I	R	Q	G	L	S	R	V	V	V	A	Q	C	E	S	T	A	T	V	R	S	V	I	P	L	G	V	P	Y	P	L	W	A	G	A	A	G	K	I	L	L	L
Template Known Secondary structure		G	G	G	G																										S	.	.	S									T	T											S		S	S						T	T					S	S	S	S							G	G
Template Predicted Secondary structure																																.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																								.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		N	Q	V	Q	R	I	E	D	V	H	V	F	D	G	H	I	A	C	D	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	E	I	V	L	P	L	V	.	V	K	N	Q	I	I	G	V	L	D	I	D	S	T	V	F	G	R	F	T	D	E	D	E	Q
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																		.
Template Conservation																																																																										.
Template Sequence		A	A	P	E	L	I	D	D	V	A	A	D	S	P	H	G	P	E	F	A	D	Q	L	R	E	K	V	E	D	G	R	E	R	G	Y	Q	L	V	H	G	E	R	E	L	G	S	S	G	L	S	F	P	L	V	D	S	H	G	T	V	V	A	A	L	T	L	G	G	P	T	G	R	.	F	T	E	D	R	T	P
Template Known Secondary structure		G		G	G	G								S	S	S		T	T																S	S					S	S	S	S	T	T											T	T													G	G	G	.	S		T	T	T
Template Predicted Secondary structure																																																																										.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	R	Q	L	V	A	Q	L	E	K	V	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	Y	I	E	C	T	R	A	A	A	E	E	I	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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