Job Description P76270 Confidence 21.32% Date Thu Jan 5 12:21:25 GMT 2012 Rank 65 Aligned Residues 138 % Identity 14% Template c2ia2D_ PDB info PDB header:transcription Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: the crystal structure of a putative transcriptional regulator rha061952 from rhodococcus sp. rha1 Resolution 2.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.									.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.
Query Sequence		N	R	D	F	N	A	L	M	A	G	E	T	S	F	L	A	T	L	A	N	T	S	A	L	L	Y	E	R	L	T	D	I	N	W	A	G	F	Y	L	L	E	D	D	T	L	V	L	G	P	F	Q	G	K	I	.	.	.	.	.	.	.	.	A	C	V	R	I	P	V	G	R	G	V	C	G	T	A	V	A	R
Query Conservation																																																								.	.	.	.	.	.	.	.
Alig confidence																																.	.																							.	.	.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		V	L	E	L	G	Y	S	Y	L	S	S	L	S	L	P	E	V	A	Q	P	H	L	E	K	L	S	H	K	V	H	.	.	E	S	S	S	V	S	I	L	D	G	A	D	I	V	Y	V	A	R	V	P	V	S	R	I	X	T	V	G	I	T	I	G	T	R	L	P	A	Y	A	T	S	X	G	R	V	L	L	A
Template Known Secondary structure		G											S	S																		.	.	S									T	T										B		S	S	S		B				T	T					G	G	G	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		83	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																														.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		N	Q	V	.	Q	R	I	E	D	V	H	V	F	D	G	H	I	A	C	D	A	A	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	I	V	L	P	L	V	.	V	K	N	Q	I	I	G	V	L	D	I	D	S	T	V	F	G	R
Query Conservation					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																		.
Template Conservation																																																																																	.
Template Sequence		G	L	P	D	D	E	L	D	A	Y	L	E	K	L	D	I	Q	R	L	T	E	R	T	I	T	A	R	D	E	L	K	A	A	I	L	A	V	R	A	D	G	I	C	V	L	D	Q	E	L	E	A	G	L	R	S	X	A	A	P	I	R	G	A	S	G	L	T	V	A	A	V	N	I	S	T	P	A	A	R	.
Template Known Secondary structure		T	S											T							S	T	T	S																		S						S	S	S	S	T	T											T	T	S	S											G	G	G	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		132	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		F	T	D	E	D	.	.	.	.	.	E	Q	G	L	R	Q	L	V	A	Q	L	E	K	V	L
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.
Template Conservation
Template Sequence		Y	S	L	E	D	L	H	S	D	L	I	P	S	L	R	V	T	A	T	D	I	E	Q	D	L
Template Known Secondary structure		S								T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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