Job Description P76270 Confidence 99.75% Date Thu Jan 5 12:21:25 GMT 2012 Rank 24 Aligned Residues 157 % Identity 18% Template c1ykdB_ PDB info PDB header:lyase Chain: B: PDB Molecule:adenylate cyclase; PDBTitle: crystal structure of the tandem gaf domains from a cyanobacterial2 adenylyl cyclase: novel modes of ligand-binding and dimerization Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		K	T	E	F	Y	A	D	L	N	R	D	F	N	A	L	M	A	G	E	T	S	F	L	A	T	L	A	N	T	S	A	L	L	Y	E	R	L	T	D	I	N	W	A	G	F	Y	L	L	E	D	D	.	.	.	.	T	L	V	L	G	P	F	Q	G	K	I	A	C	V	R	I	P	V	G	R	G	V	C	G	T
Query Conservation																																																					.	.	.	.
Alig confidence																																							.														.	.	.	.
Template Conservation																																							.
Template Sequence		K	Q	R	A	A	A	A	M	M	K	A	V	K	S	L	S	Q	S	S	L	D	L	E	D	T	L	K	R	V	M	D	E	A	K	E	L	M	.	N	A	D	R	S	T	L	W	L	I	D	R	D	R	H	E	L	W	T	K	I	T	Q	D	N	G	S	T	K	E	L	R	V	P	I	G	K	G	F	A	G	I
Template Known Secondary structure																		T																				T	.	T											T	T	T	T									T	T	T									T	T	S
Template Predicted Secondary structure																																							.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100									.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.																					.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.																.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.																.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	A	R	N	Q	V	Q	R	I	E	D	V	H	V	F	D	G	H	I	A	C	.	.	.	.	.	.	.	.	D	A	A	S	N	S	E	I	V	L	P	L	V	V	K	.	N	Q	I	I	G	V	L	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	T	V	F
Query Conservation																								.	.	.	.	.	.	.	.																.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.																.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	A	S	G	Q	K	L	N	I	P	F	D	L	Y	D	H	P	D	S	A	T	A	K	Q	I	D	Q	Q	N	G	Y	R	T	C	S	L	L	C	M	P	V	F	N	G	D	Q	E	L	I	G	V	T	Q	L	V	N	K	K	K	T	G	E	F	P	P	Y	N	P	E	T	W	P	I	A	P	E	C	F	Q
Template Known Secondary structure													S		G	G	G	S	T	T	T											T														S	S	S														S	S							G	G	G	T	T	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	F	T	D	E	D	E	Q	G	L	R	Q	L	V	A	Q	L	E	K	V	L	A	T	T	D	Y	K	K	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	F	D	R	N	D	E	E	F	M	E	A	F	N	I	Q	A	G	V	A	L	Q	N	A	Q	L	F	A	T	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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