Job Description P0AEW9 Confidence 19.16% Date Thu Jan 5 11:24:29 GMT 2012 Rank 88 Aligned Residues 158 % Identity 16% Template d2vapa1 SCOP info Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain Resolution 1.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	K	G	I	N	V	A	K	V	L	K	D	L	G	I	D	V	T	V	G	G	F	L	G	K	D	N	Q	D	G	F	Q	Q	L	F	S	E	L	G	I	A	N	R	F	Q	V	V	Q	G	R	T	R	I	N	V	K	L	T	E	K	D	G	E	V	T	D	F	N	F	S	G	F	E	V	T	P	A	D
Query Conservation
Alig confidence																															.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	G	G	A	G	N	N	T	I	T	R	L	K	M	E	G	I	E	G	A	K	T	V	A	I	N	T	D	A	.	.	.	.	.	Q	Q	L	I	R	T	K	A	D	K	K	I	L	I	G	K	K	L	T	R	.	.	.	.	.	.	.	.	.	.	.	.	G	L	G	A	G	G	N	P	K	I	G	E	E	A
Template Known Secondary structure																	T		T	T								S	B		.	.	.	.	.					T	S			S							T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	T	B			T	T
Template Predicted Secondary structure																															.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.													.	.	.	.	.	.	100	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.														.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query Sequence		W	E	R	F	V	T	D	S	L	S	W	L	G	Q	F	D	M	V	C	V	S	G	S	L	P	S	G	V	S	P	E	A	F	T	D	W	M	T	R	L	R	S	Q	C	P	C	I	I	F	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	E	A	L	V	A	G	L	K	A	A	P	W	.	.
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		A	K	E	S	A	E	E	I	K	A	A	I	Q	D	S	D	M	V	F	I	T	C	G	L	G	G	G	T	G	T	G	S	A	P	V	V	A	E	I	S	K	K	I	G	A	L	T	V	A	V	V	T	L	P	F	V	M	E	G	K	V	R	M	K	N	A	M	E	G	L	E	R	L	K	Q	H	T	D	T	L
Template Known Secondary structure					T									T	T		S								T	T	S	S																T	T												G	G	G																	T	T		S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	K	P	N	R	R	E	L	E	I	W	A	G	R	K	L	P	E	M	K	D	V	I	E	A	A	H	A	L	R	E	Q
Query Conservation
Alig confidence														.	.	.
Template Conservation														.	.	.
Template Sequence		V	V	I	P	N	E	K	L	F	E	I	V	.	.	.	P	N	M	P	L	K	L	A	F	K	V	A	D	E	V	L	I	N
Template Known Secondary structure						G	G	G					S	.	.	.	T	T
Template Predicted Secondary structure														.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions