Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEW9
Confidence100.00%DateThu Jan 5 11:24:29 GMT 2012
Rank7Aligned Residues293
% Identity27%Templatec3julA_
PDB info PDB header:transferaseChain: A: PDB Molecule:lin2199 protein; PDBTitle: crystal structure of listeria innocua d-tagatose-6-phosphate2 kinase bound with substrate
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.... .....30.........40.........50.........60.........70.........80...
Predicted Secondary structure 









.


















Query SS confidence 



















.


























































Query Sequence  VATITLNPAYDLVGFCPEIE. RGEVNLVKTTGLHAAGKGINVAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRF
Query Conservation 
  
  
  

         .              

   


  
  

        

 
 
  
   
   

    
Alig confidence 



















.


























































Template Conservation 
     

 

    
                   

   


  
  

     
  

 
 
  
   
   

    
Template Sequence  IYTITLNPAIDRLLFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSDNLDKLYAILKEKHINHDF
Template Known Secondary structure  SS

SSS

SSS



SSTT

STTTT

B

Template Predicted Secondary structure 



























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   84.. ...90......... 100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure  .






.
























Query SS confidence 


.












.





























































Query Sequence  QVV. QGRTRINVKLTEK. DGEVTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQC
Query Conservation 
  .   
         .                                
  
   
                      
Alig confidence 


.












.





























































Template Conservation         
                                                                        
Template Sequence  LVEAGTSTRECFVVLSDDTNGSTXIPEAGFTVSQTNKDNLLKQIAKKVKKEDXVVIAGSPPPHYTLSDFKELLRTVKATG
Template Known Secondary structure  TT



TT
S










TTSS


TT

TTT
Template Predicted Secondary structure 




























Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  PCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIAHVVISLGAEGALWVNASGEWIAK
Query Conservation                      


  
  
   
                 
       



 
  
             
Alig confidence 













































....



























..
Template Conservation       
              


  
  
   
             ....        



 
  
           ..
Template Sequence  AFLGCDNSGEYLNLAVEXGVDFIKPNEDEVIAILDEKTNSLEENIR. . . . TLAEKIPYLVVSLGAKGSICAHNGKLYQ. .
Template Known Secondary structure 


T
S

BT

SS
....TT
S
GGG
TT..
Template Predicted Secondary structure 














....









..
Template SS confidence 















































































   162.......170.........180.........190.........200....... ..210.........220.........230.....
 
   242.......250.........260.........270.........280.........290.........300.........310..
Predicted Secondary structure 




























Query SS confidence 






































































Query Sequence  PPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN
Query Conservation       








 
 

 
  
  
     

  
 
 

  
   
               
      
Alig confidence  .....











































....

















Template Conservation  .....










 

 
  
  
     
   
 
 

  
    ....       
   
      
Template Sequence  . . . . . VIPPTGAGDVFVGAFIAGLAXNXPITETLKVATGCSASKVXQQF. . . . DLEAAGKLKNQVSIIQLE
Template Known Secondary structure  .....



TT

TT


....
TT

Template Predicted Secondary structure  .....













....



Template SS confidence 






































































   236...240.........250.........260.........270......... 280.........290.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions