 |
Job Description | P0AEW9 | Confidence | 100.00% | Date | Thu Jan 5 11:24:29 GMT 2012 |
Rank | 22 | Aligned Residues | 294 |
% Identity | 19% | Template | c3iq0B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:putative ribokinase ii; |
PDBTitle: crystal structure of a putative ribokinase ii in complex2 with atp and mg+2 from e.coli
|
Resolution | 1.79 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | R | R | V | A | T | I | T | L | N | P | A | Y | D | L | V | G | F | C | P | E | I | E | R | G | E | V | N | L | V | K | T | T | G | L | H | A | A | G | K | G | I | N | V | A | K | V | L | K | D | L | G | I | D | V | T | V | G | G | F | L | G | K | D | . |
N | Q | D | G | F | Q | Q | L | F | S | E | L | G | I |
Query Conservation |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |
| . |   |
|   |   |
|   |   |   |
|   |   |   |
|
|
Alig confidence |   |
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   | . |   |
|   |   |
|
| . |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |   |
|   |   |
|
|   |   |   |   |
|
|   |   |
|
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|
Template Sequence |   |
L | S | . |
K | V | F | T | I | G | . |
E | I | L | V | E | I | X | A | S | K | I | G | Q | P | F | D | Q | . |
. |
P | G | I | W | N | G | P | Y | P | S | G | A | P | A | I | F | I | D | Q | V | T | R | L | G | V | P | C | G | I | I | S | C | V | G | N | D | G | F | G | D | I | N | I | H | R | L | A | A | D | G | V |
Template Known Secondary structure |   |
|
| . |  |  |  |  |  | S | . |
|
|  |  |  |  |  |  | S | S | T | T |
|
| S | S | S | . | . |
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
| . |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|