 |
Job Description | P0AEW9 | Confidence | 100.00% | Date | Thu Jan 5 11:24:29 GMT 2012 |
Rank | 27 | Aligned Residues | 274 |
% Identity | 20% | Template | c3i3yB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:carbohydrate kinase; |
PDBTitle: crystal structure of ribokinase in complex with d-ribose from2 klebsiella pneumoniae
|
Resolution | 2.15 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
. | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | R | R | V | A | T | I | T | L | N | P | A | Y | D | L | V | G | F | C | P | E | I | E | . |
R | G | E | V | N | L | V | K | T | T | G | L | H | A | A | G | K | G | I | N | V | A | K | V | L | K | D | L | G | I | D | V | T | V | G | G | F | L | G | K | D | . |
N | Q | D | G | F | Q | Q | L | F | S | E | L | G |
Query Conservation |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |
| . |   |
|   |   |
|   |   |   |
|   |   |   |
|
Alig confidence |   |
|
| . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
| . | . |
|   |
|
|
| . |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |
|   |   |
|
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|
Template Sequence |   |
L | R | . |
. |
V | Y | V | T | G | . |
N | I | T | V | D | E | T | W | S | I | P | D | I | P | K | K | G | A | S | I | H | G | V | K | V | S | Q | D | I | G | G | K | G | A | N | Q | A | I | I | L | S | R | C | G | I | E | T | R | L | I | A | A | T | G | N | D | S | N | G | A | W | I | R | Q | Q | I | K | N | E | P |
Template Known Secondary structure |   |
|  | . | . |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |
| S | S |
|
|
| T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
|
|
| S | S |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
Template Predicted Secondary structure |   |
|  | . | . |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|