Job Description P0AEW9 Confidence 99.74% Date Thu Jan 5 11:24:29 GMT 2012 Rank 49 Aligned Residues 226 % Identity 19% Template c2i5bC_ PDB info PDB header:transferase Chain: C: PDB Molecule:phosphomethylpyrimidine kinase; PDBTitle: the crystal structure of an adp complex of bacillus2 subtilis pyridoxal kinase provides evidence for the3 parralel emergence of enzyme activity during evolution Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		E	V	N	L	V	K	T	T	G	L	H	A	A	G	K	G	I	N	V	A	.	K	V	L	K	D	L	G	I	D	V	T	V	G	G	F	L	G	K	D	N	Q	D	G	F	Q	Q	L	F	S	E	L	G	I	A	N	R	F	Q	V	V	Q	G	R	T	R	I	N	V	K	L	T	E	K	D	G	E	V	T	D
Query Conservation																						.
Alig confidence																						.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	K	A	L	T	I	A	G	S	D	S	S	G	G	A	G	I	Q	A	D	L	K	T	F	Q	E	K	N	V	Y	G	M	T	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	I	V	A	M	D	P	N	N	S	W	N	H
Template Known Secondary structure												T	T	S	S	S												T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																																.	40	.	.	.	.	.	.	.	.	.	50	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170													.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	N	F	S	G	F	E	V	T	P	A	D	W	E	R	F	V	T	D	S	L	S	W	L	G	Q	F	D	M	V	C	V	S	G	S	L	P	S	G	V	S	P	E	A	F	T	D	W	M	T	R	L	R	S	Q	C	P	C	I	I	F	D	S	S	R	.	.	.	.	.	.	.	.	.	.	.	.	E	A	L
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.																.										.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.																.										.
Template Sequence		Q	V	F	P	.	.	.	I	D	T	D	T	I	R	A	Q	L	A	T	I	T	D	.	G	I	G	V	D	A	M	K	T	.	G	M	L	P	T	V	D	I	I	E	L	A	A	K	T	I	K	E	K	Q	L	K	N	V	V	I	D	P	V	M	V	C	K	G	A	N	E	V	L	Y	P	E	H	A	Q	A	L
Template Known Secondary structure						.	.	.															T	.	T	S			S					.					S														T	T		S	S								S	S	B		S	S	S	B	S
Template Predicted Secondary structure						.	.	.																.										.
Template SS confidence
		53	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.							230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																									.																																		.	.	.	.	.	.
Query SS confidence																									.																																		.	.	.	.	.	.
Query Sequence		V	A	G	L	K	A	A	P	W	L	V	K	P	N	R	R	E	L	E	I	W	A	G	.	R	K	L	P	E	M	K	D	V	I	E	A	A	H	A	L	R	E	Q	G	I	A	H	V	V	I	S	L	G	A	E	G	A	.	.	.	.	.	.	L	W	V	N	A	S	G	E	W	I	A	K	P	P	S	V	D
Query Conservation																									.																																		.	.	.	.	.	.
Alig confidence																									.																																		.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	Q	L	A	P	L	A	T	V	I	T	P	N	L	F	E	A	S	Q	L	S	G	M	D	E	L	K	T	V	D	D	M	I	E	A	A	K	K	I	H	A	L	G	A	Q	Y	V	V	I	T	G	G	G	K	L	K	H	E	K	A	V	D	V	L	Y	D	G	E	T	A	E	V	L	E	S	E	M	I	D
Template Known Secondary structure					T	G	G	G		S					B									T						S													T	T	T		S							G	G	G	S		S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	S	T	V	G	A	G	D	S	M	V	G	G	L	I	Y	G	L	L	M	R	E	S	S	E	H	T	L	R	L	A	T	A	V	A	A	L	A	V	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	Y	T	H	G	A	G	C	T	F	S	A	A	V	T	A	E	L	A	K	G	A	E	V	K	E	A	I	Y	A	A	K	E	F	I	T	A	A	I	K	E
Template Known Secondary structure			S			B	T															T	T																				T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions