Return to main results Retrieve Phyre Job Id

Job DescriptionP36661
Confidence6.32%DateThu Jan 5 11:53:33 GMT 2012
Rank56Aligned Residues88
% Identity18%Templatec3e9hB_
PDB info PDB header:ligaseChain: B: PDB Molecule:lysyl-trna synthetase; PDBTitle: lysyl-trna synthetase from bacillus stearothermophilus2 complexed with l-lysylsulfamoyl adenosine
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   276...280.........290.........300. ....... .310.........320.........330.........340....
Predicted Secondary structure 

..........




.











Query SS confidence 

























. . . . . . . . . .






.



































Query Sequence  SDNQIQGQSSLMSWSFLFFKKQFIDS. . . . . . . . . . CLNNEKC. ILHLPEFIFNDNKNLLALDTDTSDRIKAVKNFLVVL
Query Conservation 
 






 


   





 


..........






.

  

 






 





 












 
Alig confidence 

























..........






.










..





.















Template Conservation            

  



  
 
 
 
  




   

 
     
 



 

.. 
 

 .
  


   
 

  
Template Sequence  THHNALDMTLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNPEFTMLE. . LYEAYA. DFRDIMKLTENLIAHI
Template Known Secondary structure  TTTT
S
STT






BTTB
S..T
.
Template Predicted Secondary structure 



























..

.
Template SS confidence 















































































   215....220.........230.........240.........250.........260......... 270..... ....280.........290.
 
   345....350.........360......
Predicted Secondary structure 




Query SS confidence 





















Query Sequence  SDSICSLFIVNSNVASISLGNE
Query Conservation 



 
 

 
 



 




Alig confidence 





















Template Conservation                   
    
Template Sequence  ATEVLGTTKIQYGEHLVDLTPE
Template Known Secondary structure  S
STT

SS
Template Predicted Secondary structure 









Template SS confidence 





















   292.......300.........310...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions