 |
Job Description | P36661 | Confidence | 6.85% | Date | Thu Jan 5 11:53:33 GMT 2012 |
Rank | 50 | Aligned Residues | 67 |
% Identity | 16% | Template | c2yv5A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:yjeq protein; |
PDBTitle: crystal structure of yjeq from aquifex aeolicus
|
Resolution | 1.90 Å |
|
 |
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | |
|
. | . | . | . | . | . | . | . | 190 | . | . | . | . | |
. | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|  |  |  |  |  |  |
| . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | N | T | P | G | I | S | D | L | D | S | . |
. |
D | I | D | L | S | G | I | S | F | I | Q | R | E | . |
T | N | Q | A | L | G | L | K | Y | A | P | V | D | G | D | G | Y | C | L | L | R | A | I | L | V | L | K | Q | H | D | Y | S | W | A | L | V | S | Y | K | M | Q | K | E | V | Y | N | E | F | I | K | M | V | D |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |
|   |
|   |
|
|   |
|   |   |
|
|
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|   |
|   |   |   |
|
|   |   |
|   |   |
|   |   |
Template Sequence |   |
G | D | T | P | G | F | S | K | V | E | A | T | M | F | V | K | P | R | E | V | R | N | Y | F | R | E | F | L | R | Y | Q | C | K | Y | P | D | C | T | H | T | N | E | P | G | C | A | V | K | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | V | K | N | G | E | I | S | C | E | R | Y | K | S | Y | L | K | I | I | K |
Template Known Secondary structure |   |
 | S | S |
|
|
| S | S |
|
| G | G | G | T | S |
| G | G | G | G | G | G | G |
| G | G | G |  |  |  |  |  |  | S | T | T |
|
| S | S | S |
| T | T |
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . |
  |
  |   |
248 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
K |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
V |
Template Known Secondary structure |   |
|
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
290 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|