Return to main results Retrieve Phyre Job Id

Job DescriptionP77211
Confidence100.00%DateThu Jan 5 12:26:21 GMT 2012
Rank2Aligned Residues440
% Identity44%Templated1wp1a_
SCOP infoOuter membrane efflux proteins (OEP) Outer membrane efflux proteins (OEP) Outer membrane efflux proteins (OEP)
Resolution2.56

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.... .....50.........60.........70.........80.........90....
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Query Sequence  CSLAPDYQRPAMPVPQQFSLSQNGLVN. . . AADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQEARAQYRLT
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Template Sequence  CSLIPDYQRPEAPVAAAYPQGQAYGQNTGAAAVPAADIGWREFFRDPQLQQLIGVALENNRDLRVAALNVEAFRAQYRIQ
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S
SS


STT





S
SS
GGGS
B


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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   95....100......... 110.........120.........130.........140.........150.........160........
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Query Sequence  DADRYPQLNGEGSGS. . . . . . WSGNLKGNTATTREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSN
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Template Conservation       
 
                                         
        
                 
   
Template Sequence  RADLFPRIGVDGSGTRQRLPGDLSTTGSPAISSQYGVTLGTTAWELDLFGRLRSLRDQALEQYLATEQAQRSAQTTLVAS
Template Known Secondary structure  TTS


B


B



B

TTTSSSSS

B



B

TT
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   169170.........180.........190.........200.........210.........220.........230.........240........
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Query Sequence  VAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLGS
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Template Conservation 
  

         
                       
     
   
          
         
   
  
 
 
Template Sequence  VATAYLTLKADQAQLQLTKDTLGTYQKSFDLTQRSYDVGVASALDLRQAQTAVEGARATLAQYTRLVAQDQNALVLLLGS
Template Known Secondary structure  TT
S
TS
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   249250.........260.........270.........280.........290.........300.........310.........320........
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Query Sequence  YGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASSDLSSLFNAS
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Template Conservation                             

   
 
         
            
 
 
                  
Template Sequence  GIPANLPQGLGLDQTLLTEVPAGLPSDLLQRRPDILEAEHQLMAANASIGAARAAFFPSISLTANAGTMSRQLSGLFDAG
Template Known Secondary structure 


SS





TTS

B






TT
TTS




SSGGGTTSTT
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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   329330.........340.........350.........360.........370.........380.........390.........400........
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Query Sequence  SGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRA
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Template Sequence  SGSWLFQPSINLPIFTAGSLRASLDYAKIQKDINVAQYEKAIQTAFQEVADGLAARGTFTEQLQAQRDLVKASDEYYQLA
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SSTT
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   321........330.........340.........350.........360.........370.........380.........390.........400
 
   409410.........420.........430.........440.........450.......
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Query Sequence  RALYQHGAVSYLEVLDAERSLFATRQTLLDLNYARQVNEISLYTALGGG
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Template Sequence  DKRYRTGVDNYLTLLDAQRSLFTAQQQLITDRLNQLTSEVNLYKALGGG
Template Known Secondary structure  TTSS
T
S
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   401........410.........420.........430.........440.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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