Job Description P77211 Confidence 1.89% Date Thu Jan 5 12:26:21 GMT 2012 Rank 100 Aligned Residues 69 % Identity 17% Template c2npsC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:vesicle transport through interaction with t- PDBTitle: crystal structure of the early endosomal snare complex Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	Q	L	A	Y	A	Q	L	Q	I	A	E	E	T	L	R	N	Y	Q	Q	S	Y	A	F	V	E	K	Q	L	L	T	G	S	S	N	V	L	A	L	E	Q	A	R	G	V	I	E	S	T	R	S	D	I	A	K	R	Q	G	E	L	A	Q	A	N	N	A	L	Q	L	L	L
Query Conservation
Alig confidence																													.	.	.
Template Conservation																													.	.	.
Template Sequence		H	L	L	D	N	T	E	R	L	E	R	S	S	R	R	L	E	A	G	Y	Q	I	A	V	E	T	E	.	.	.	Q	I	G	Q	E	M	L	E	N	L	S	H	D	R	E	R	I	Q	R	A	R	E	R	L	R	E	T	D	A	N	L	G	K	S	S	R	I	L	T	G	M	L
Template Known Secondary structure															T														.	.	.
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions