Return to main results Retrieve Phyre Job Id

Job DescriptionP11349
Confidence99.94%DateThu Jan 5 11:32:35 GMT 2012
Rank13Aligned Residues193
% Identity13%Templated3c8ya1
SCOP infoFe-only hydrogenase Fe-only hydrogenase Fe-only hydrogenase
Resolution1.39

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   273......280.........290.........300 .........310.........320.........330.........340....
Predicted Secondary structure 







........














Query SS confidence 



























. . . . . . . .











































Query Sequence  LLYDADAIERAASTENEKDLYQRQLDVF. . . . . . . . LDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMAMEWKLALPLH
Query Conservation                              ........               
       
     
              
Alig confidence 



























........

























...














Template Conservation   
  
   
    
  
 



  



   

         

   

 


  
 

   ...

  
 
   
   
Template Sequence  HMDRVKNALNAPEKHVIVAMAPSVRASIGELFNMGFGVDVTGKIYTALRQLGFDKIFDINFG. . . ADMTIMEEATELVQR
Template Known Secondary structure 

TT

GGGGGTGGGGGT

SS


T
S...
Template Predicted Secondary structure 

















...
Template SS confidence 















































































   210.........220.........230.........240.........250.........260.........270. ........280......
 
   345....350.........360.........370.........380.........390...... ...400.........410.....
Predicted Secondary structure  .


















........




Query SS confidence  .



















































. . . . . . . .


















Query Sequence  . PEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLANLLTA. . . . . . . . GDTKPVLRALKRMLAMRHY
Query Conservation  .      
      
                 
         

   
     ........         
  
 
 
  
Alig confidence  .













.....
































........


















Template Conservation         
 


 

.....


 



  




 

 




 
 
 
 
        
    
  
 



 


 
Template Sequence  IENNGPFPMFTSCCP. . . . . GWVRQAENYYPELLNNLSSAKSPQQIFGTASKTYYPSISGLDPKNVFTVTVMPCTSKKFE
Template Known Secondary structure  T
S





.....
GGGGGGB

B

TTTT


GGGS
S
Template Predicted Secondary structure 







.....


















Template SS confidence 















































































   287..290.........300. ........310.........320.........330.........340.........350.........360.
 
   416...420.........430.........440......... 450.........460.........470.....
Predicted Secondary structure 











...



















Query SS confidence 

































. . .

























Query Sequence  KRAETVDGKVDTRALEEVGLTEAQAQEMYRYLAI. . . ANYEDRFVVPSSHRELAREAFPEKNG
Query Conservation   
                 

            
...   
 
 
 
              

Alig confidence  ..































...

























Template Conservation  ..
 
 
       


 



 

  

    
    
     
      
        


Template Sequence  . . ADRPQMEKDGLRDIDAVITTRELAKMIKDAKIPFAKLEDSEADPAMGEYSGAGAIFGATGG
Template Known Secondary structure  ..T
TTSTTS
STT

GGG






GGGT


TTTSTT
Template Predicted Secondary structure  ..



































Template SS confidence 






























































   362.......370.........380.........390.........400.........410.........420..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions