Job Description P11349 Confidence 25.20% Date Thu Jan 5 11:32:35 GMT 2012 Rank 78 Aligned Residues 41 % Identity 17% Template c3ktwA_ PDB info PDB header:rna/rna binding protein Chain: A: PDB Molecule:signal recognition particle 19 kda protein; PDBTitle: crystal structure of the srp19/s-domain srp rna complex of sulfolobus2 solfataricus Resolution 3.20 Å

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		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.														.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	A	A	S	T	E	N	E	K	D	L	Y	Q	R	Q	L	D	V	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	N	D	P	K	V	I	E	Q	A	I	K	D	G	I	P	L	S	V	I
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.
Template Sequence		L	R	D	L	K	E	E	N	R	I	V	I	W	P	S	Y	F	F	S	.	P	T	R	S	K	G	R	R	L	A	R	I	P	Y	K	I	K	T	E	E	L	V	S	T	L	R	E	L	G	L	D	P	I	V	I
Template Known Secondary structure		T	T	G	G	G	G	G	T						T						.	S	S	G	G	G	T			S	S			S	S														T	T
Template Predicted Secondary structure																					.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions