Job Description P11349 Confidence 16.98% Date Thu Jan 5 11:32:35 GMT 2012 Rank 90 Aligned Residues 32 % Identity 16% Template c3dluA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:signal recognition particle 19 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus. Resolution 1.80 Å

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		292	.	.	.	.	.	.	.	300																.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	Q	R	Q	L	D	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	P	N	D	P	K	V	I	E	Q	A	I	K	D	G	I	P	L	S	V	I	E
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	W	P	S	E	L	D	S	R	L	S	R	K	Y	G	R	I	V	P	R	S	I	A	V	E	S	P	R	V	E	E	I	V	R	A	A	E	E	L	K	F	K	V	I	R	V	E
Template Known Secondary structure				G	G	G	G	B	T	T	S		G	G	G	T			S		T	T	T	S	B	S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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