 |
Job Description | P11349 | Confidence | 15.61% | Date | Thu Jan 5 11:32:35 GMT 2012 |
Rank | 93 | Aligned Residues | 78 |
% Identity | 15% | Template | c3c6fD_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: D: PDB Molecule:yetf protein; |
PDBTitle: crystal structure of protein bsu07140 from bacillus subtilis
|
Resolution | 2.50 Å |
|
 |
  |   |
422 | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | G | K | V | D | T | R | A | L | E | E | V | G | L | T | E | A | Q | A | Q | E | M | Y | R | Y | L | A | I | A | N | Y | E | D | R | F | V | V | P | S | S | H | R | E | L | A | R | E | A | F | P | E | K | N | G | C | G | F | T | F | G | D | G | C | H | G | S | D | T | K | F | N | L | F | N | S | R | R | I | D | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|
|
|
|   |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |
Template Sequence |   |
K | G | E | L | Q | Y | K | V | M | K | K | N | K | I | D | I | N | Q | L | Q | S | M | L | R | Q | A | G | S | F | S | I | Q | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | E | Y | A | I | M | E | T | N | G | M | V | S | V | L | P | K | S | D | F | D | K | P | T | N | K | D | M | Q | I | P | S | K | S | V | S |
Template Known Secondary structure |   |
T | T |  |  |
|  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | G | G | G | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |
| G | G | G | S |
|
|
| T | T | T | T | T |
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
  |
  |   |
502 | . | . | |
|
. | . | . | . | . | 510 |
Predicted Secondary structure |   |
 |  |
| . | . |
|
|
|
|
|
|
Query SS confidence |   |
|
|
| . |
. |
|
|
|
|
|
|
Query Sequence |   |
I | D | V | . |
. |
T | S | K | T | E | P |
Query Conservation |   |
  |   |   | . | . |   |   |   |   |   |   |
Alig confidence |   |
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |
|
|   |
|
Template Sequence |   |
L | P | I | T | L | I | I | D | G | E | I |
Template Known Secondary structure |   |
|
|  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
169 | 170 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|