Job Description P11349 Confidence 100.00% Date Thu Jan 5 11:32:35 GMT 2012 Rank 8 Aligned Residues 257 % Identity 15% Template c1gx7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [fe] hydrogenase large subunit; PDBTitle: best model of the electron transfer complex between2 cytochrome c3 and [fe]-hydrogenase Resolution UNK

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	Y	L	P	R	L	C	E	H	C	L	N	P	A	C	V	A	T	C	P	S	G	A	I	Y	K	R	E	E	D	G	I	V	L	I	D	Q	D	K	C	R	G	W	R	M	C	I	T	G	C	P	Y	K	K	I	Y	F	N	W	K	S	G	K	S	E	K	C	I	F	C	Y	P	R	I	E	A	G	Q	P
Query Conservation
Alig confidence															.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	I	D	E	A	K	C	I	G	C	D	T	.	.	C	S	Q	Y	C	P	T	A	A	I	F	G	E	M	G	E	P	H	S	I	P	H	I	E	A	C	I	N	C	G	Q	C	L	T	H	C	P	E	N	A	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T	S			S			S	.	.	G	G	G	G		T	T	S			B			T	T	S			B				T	T	T	S		S			S	S	S	T	T	S	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300									.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.
Query Sequence		T	V	C	S	E	T	C	V	G	R	I	R	Y	L	G	V	L	L	Y	D	A	D	A	I	E	R	A	A	S	T	E	N	E	K	D	L	Y	Q	R	Q	L	D	V	F	.	.	.	.	.	.	.	.	L	D	P	N	D	P	K	V	I	E	Q	A	I	K	D	G	I	P	L	S	V	I	E	A	A	Q	Q	S
Query Conservation																																														.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.																											.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																																			.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	E	A	Q	S	W	V	P	E	V	E	K	K	L	K	D	G	K	V	K	C	I	A	M	P	A	P	A	V	R	Y	A	L	G	D	A	F	G	M	P	V	G	S	V	T	T	G	K	M	L	A	A	L	Q	K	L	G	F	A	H	C	W	D	T	E	F	T	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.		S													T	T	T	S															G	G	G	G	T			S	S	S		T											T	T				B							.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																																			.	.
Template SS confidence
														83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350				.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.																																																	.	.	.	.	.	.	.
Query SS confidence																								.	.	.																																																	.	.	.	.	.	.	.
Query Sequence		P	V	Y	K	M	A	M	E	W	K	L	A	L	P	L	H	P	E	Y	R	T	L	.	.	.	P	M	V	W	Y	V	P	P	L	S	P	I	Q	S	A	A	D	A	G	E	L	G	S	N	G	I	L	P	D	V	E	S	L	R	I	P	V	Q	Y	L	A	N	L	L	T	A	G	D	.	.	.	.	.	.	.
Query Conservation																								.	.	.																																																	.	.	.	.	.	.	.
Alig confidence		.																						.	.	.									.	.	.	.	.																																				.	.	.	.	.	.	.
Template Conservation		.																																	.	.	.	.	.
Template Sequence		.	A	D	V	T	I	W	E	E	G	S	E	F	V	E	R	L	T	K	K	S	D	M	P	L	P	Q	F	T	S	C	C	P	.	.	.	.	.	G	W	Q	K	Y	A	E	T	Y	Y	P	E	L	L	P	H	F	S	T	C	K	S	P	I	G	M	N	G	A	L	A	K	T	Y	G	A	E	R	M	K	Y	D
Template Known Secondary structure		.																	T	T	S	S				S	S								.	.	.	.	.											G	G	G	G	G	G	S		S													T	T						T	T
Template Predicted Secondary structure		.																																	.	.	.	.	.
Template SS confidence
			149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
			399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.				450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure		.																																																				.	.	.
Query SS confidence		.																																																				.	.	.
Query Sequence		.	T	K	P	V	L	R	A	L	K	R	M	L	A	M	R	H	Y	K	R	A	E	T	V	D	G	K	V	D	T	R	A	L	E	E	V	G	L	T	E	A	Q	A	Q	E	M	Y	R	Y	L	A	I	.	.	.	A	N	Y	E	D	R	F	V	V	P	S	S	H	R	E	L	A	R	E	A	F	P	E	K	N
Query Conservation		.																																																				.	.	.
Alig confidence		.																		.	.																																	.	.	.
Template Conservation																				.	.
Template Sequence		P	K	Q	V	Y	T	V	S	I	M	P	C	I	A	K	K	Y	E	.	.	G	L	R	P	E	L	K	S	S	G	M	R	D	I	D	A	T	L	T	T	R	E	L	A	Y	M	I	K	K	A	G	I	D	F	A	K	L	P	D	G	K	R	D	S	L	M	G	E	S	T	G	G	A	T	I	F	G	V	T	G
Template Known Secondary structure		G	G	G								S		T						.	.		T	S	T	T	S		B	T	T	B		S																	T	T			G	G	G								T	T	S					S	T	T	S		S	S	S	T	T
Template Predicted Secondary structure																				.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		475	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	G	F	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	M	E	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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