Job Description P11349 Confidence 99.21% Date Thu Jan 5 11:32:35 GMT 2012 Rank 22 Aligned Residues 93 % Identity 19% Template c1gthD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil Resolution 2.25 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		E	K	G	P	N	W	E	D	D	L	G	G	E	F	D	K	L	A	K	D	K	N	F	D	N	I	Q	K	A	M	Y	S	Q	F	E	N	T	F	M	M	Y	L	P	R	L	C	E	H	C	L	N	P	A	C	V	A	T	C	.	.	.	P	S	G	A	I	Y	K	R	E	E	D	G	I	V	L	I	D	Q	D
Query Conservation																																																												.	.	.
Alig confidence																																																					.	.						.	.	.									.
Template Conservation																																																					.	.																	.
Template Sequence		E	R	K	P	F	I	P	K	K	P	I	P	A	I	K	D	V	I	G	K	A	L	Q	Y	L	G	T	F	G	E	L	S	N	I	E	Q	V	V	A	V	I	D	E	E	M	C	I	N	C	G	K	.	.	C	Y	M	T	C	N	D	S	G	Y	Q	A	I	Q	F	D	.	P	E	T	H	L	P	T	V	T	D
Template Known Secondary structure									S	S									T	T	T	T	G	G	G				G	G	G	S		S	S	S								T	T	T							.	.									S		S						.	T	T	T							T
Template Predicted Secondary structure																																																					.	.																	.
Template SS confidence
		908	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.			.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.		.	.	.	.	.	980	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		K	C	R	G	W	R	M	C	I	T	G	C	P	Y	.	K	K	I	Y	F
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		T	C	T	G	C	T	L	C	L	S	V	C	P	I	I	D	C	I	R	M
Template Known Secondary structure		T												S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		985	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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