Job Description P11349 Confidence 100.00% Date Thu Jan 5 11:32:35 GMT 2012 Rank 9 Aligned Residues 254 % Identity 17% Template c1c4cA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (fe-only hydrogenase); PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum Resolution 2.40 Å

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		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.													.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	E	E	D	G	I	V	L	I	D	Q	D	K	C	R	G	W	R	M	C	I	T	G	C	P	.	.	.	.	Y	K	K	I	Y	F	N	W	K	S	G	K	S	.	.	.	.	.	.	.	.	.	.	.	.	E	K	C	I	F	C	Y	P	R	I	E	A	G	Q	P	T	V	C	S	E	T	C	V	G	R
Query Conservation																												.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.
Template Sequence		V	D	E	R	S	K	S	L	T	V	D	R	T	K	C	L	L	C	G	R	C	V	N	A	C	G	K	N	T	E	T	Y	A	M	K	F	L	N	K	N	G	K	T	I	I	G	A	E	D	E	K	C	F	D	D	T	N	C	L	L	C	G	.	.	.	.	.	.	.	.	.	Q	C	I	I	A	C	P	V	A
Template Known Secondary structure						S	S	S					T	T	S															T	S				S						T	T						S	G	G	G			G	G	G	S	S						.	.	.	.	.	.	.	.	.							S	S	S
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.										.	.	.	.	.	200	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300									.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.
Query Sequence		I	R	Y	L	G	V	L	L	Y	D	A	D	A	I	E	R	A	A	S	T	E	N	E	K	D	L	Y	Q	R	Q	L	D	V	F	.	.	.	.	.	.	.	.	L	D	P	N	D	P	K	V	I	E	Q	A	I	K	D	G	I	P	L	S	V	I	E	A	A	Q	Q	S	P	V	Y	K	M	A	M	E	W	K
Query Conservation																																				.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.																											.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		A	L	S	E	K	S	H	M	D	R	V	K	N	A	L	N	A	P	E	K	H	V	I	V	A	M	A	P	S	V	R	A	S	I	G	E	L	F	N	M	G	F	G	V	D	V	T	G	K	I	Y	T	A	L	R	Q	L	G	F	D	K	I	F	D	I	N	F	G	.	.	.	A	D	M	T	I	M	E	E	A
Template Known Secondary structure		S																	T	T									T	T	G	G	G	T	G	G	G	G	G	T			S	S														T	T		S									.	.	.
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280
		339	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.									.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																																																			.	.	.	.	.	.	.	.
Query SS confidence											.																																																			.	.	.	.	.	.	.	.
Query Sequence		L	A	L	P	L	H	P	E	Y	.	R	T	L	P	M	V	W	Y	V	P	P	L	S	P	I	Q	S	A	A	D	A	G	E	L	G	S	N	G	I	L	P	D	V	E	S	L	R	I	P	V	Q	Y	L	A	N	L	L	T	A	G	.	.	.	.	.	.	.	.	D	T	K	P	V	L	R	A	L	K	R	M
Query Conservation											.																																																			.	.	.	.	.	.	.	.
Alig confidence											.												.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		T	E	L	V	Q	R	I	E	N	N	G	P	F	P	M	F	T	S	C	C	P	.	.	.	.	.	G	W	V	R	Q	A	E	N	Y	Y	P	E	L	L	N	N	L	S	S	A	K	S	P	Q	Q	I	F	G	T	A	S	K	T	Y	Y	P	S	I	S	G	L	D	P	K	N	V	F	T	V	T	V	M	P	C
Template Known Secondary structure									T	T	T		S	S									.	.	.	.	.									T		G	G	G	T	T	T	B		S	B												T	T						S	S			G	G	G								S
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.				450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		L	A	M	R	H	Y	K	R	A	E	T	V	D	G	K	V	D	T	R	A	L	E	E	V	G	L	T	E	A	Q	A	Q	E	M	Y	R	Y	L	A	I	.	.	.	A	N	Y	E	D	R	F	V	V	P	S	S	H	R	E	L	A	R	E	A	F	P	E	K	N	G
Query Conservation																																										.	.	.
Alig confidence								.	.																																	.	.	.
Template Conservation								.	.
Template Sequence		T	S	K	K	F	E	.	.	A	D	R	P	Q	M	E	K	D	G	L	R	D	I	D	A	V	I	T	T	R	E	L	A	K	M	I	K	D	A	K	I	P	F	A	K	L	E	D	S	E	A	D	P	A	M	G	E	Y	S	G	A	G	A	I	F	G	A	T	G	G
Template Known Secondary structure		S						.	.		T		T	T	S			T	T			S		S															T	T			G	G	G								G	G	G	T								T	T	T	S	T	T
Template Predicted Secondary structure								.	.
Template SS confidence
		356	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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