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Job DescriptionP13035
Confidence99.06%DateThu Jan 5 11:33:30 GMT 2012
Rank167Aligned Residues208
% Identity13%Templated2iida1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40 .........50.........60.....
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Query Sequence  ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA. . . . . TSSASSKLIHGGLRYLEHYEFRLVS. . . . . . . . . . .
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Template Sequence  NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLNE
Template Known Secondary structure  S



BT

SSSSSBTT

TTTTSS


TT
TT

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   32.......40.........50.........60.........70.........80.........90.........100.........110.
 
   66...70.........80.........90.........100..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIR
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Template Conservation                                                                                  
Template Sequence  FSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRTNCSYILNKYDTYSTKEYLIK
Template Known Secondary structure 
S

TTSTT
GGGG




GGGTT

TS
TTSB
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   112.......120.........130.........140.........150.........160.........170.........180.........190.
 
   103......110.........120.........130.........140.........150.........160.........170.........180..
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Query Sequence  IGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLW
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Template Sequence  EGDLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFAYEKRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKV
Template Known Secondary structure  TS


TT
GGGTTSBTT


TT
TTTGGGSS

SS
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   192.......200.........210.........220.........230.........240.........250.........260.........270.
 
   183......190.........200.........210
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Query Sequence  IVEAEDIDTGKKYSWQARGLVNATGPWV
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Template Sequence  TVVYETL. SKETPSVTADYVIVCTTSRA
Template Known Secondary structure 
S.SS


S
S
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   272...... .280.........290........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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