Job Description P13035 Confidence 99.39% Date Thu Jan 5 11:33:30 GMT 2012 Rank 98 Aligned Residues 290 % Identity 14% Template c3ihgA_ PDB info PDB header:flavoprotein, oxidoreductase Chain: A: PDB Molecule:rdme; PDBTitle: crystal structure of a ternary complex of aklavinone-112 hydroxylase with fad and aklavinone Resolution 2.49 Å

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		1	.	.			.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		M	E	T	.	.	K	D	L	I	V	I	G	G	G	I	N	G	A	G	I	A	A	D	A	A	G	R	G	L	S	V	L	M	L	E	A	Q	D	L	A	C	A	T	S	S	A	S	S	K	L	I	H	G	G	L	R	Y	L	E	H	Y	E	F	R	L	V	S	E	A	L	A	E	R	E	V	L	L	K	M	A
Query Conservation					.	.
Alig confidence					.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	N	D	H	E	V	D	V	L	V	V	G	A	G	L	G	G	L	S	T	A	M	F	L	A	R	Q	G	V	R	V	L	V	V	E	R	R	P	G	L	S	P	Y	P	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	Q	N	P	R	T	M	E	L	L	R	I	G	G	V	A	D	E	V	V
Template Known Secondary structure						S									S												T	T	T								S	S	S	S							S	.	.	.	.	.	.	.	.	.	.	.	.	.			B											T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.														.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	I	A	F	P	M	R	F	R	L	P	H	R	P	H	L	R	P	A	W	M	I	R	I	G	L	F	M	Y	D	H	L	G	K	R	T	S	L	P	G	S	T	G	L	R	F	G	A	N	S	V	L	K	P	E	I	K	R	G	F	E	Y	S	D	C	W	V	D	D	A	R	L	V	L	A	N	A	Q	M
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	D	D	I	R	G	T	Q	G	D	F	V	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	E	S	V	R	G	E	I	L	R	T	V	S	E	S	F	D	D	M	V	A	A	T	E	P	C	T	P	A	G	W	A	M	L	S	Q	D	K	L	E	P	I	L	L	A	Q
Template Known Secondary structure			S			S	S		T	T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S	S	S								S								T	T	G	G	G		S				B
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.																			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		V	V	R	K	G	G	E	V	L	T	R	T	R	A	T	S	A	R	R	E	N	G	.	.	L	W	I	V	E	A	E	D	I	D	T	G	K	K	Y	S	W	Q	A	R	G	L	V	N	A	T	G	P	W	V	K	Q	F	F	D	D	G	M	H	L	P	S	P	Y	G	I	R	L	I	K	G	S	H	I	V	V
Query Conservation																								.	.
Alig confidence																								.	.
Template Conservation
Template Sequence		A	R	K	H	G	G	A	I	R	F	G	T	R	L	L	S	F	R	Q	H	D	D	D	A	G	A	G	V	T	A	R	L	A	G	P	D	G	E	Y	D	L	R	A	G	Y	L	V	G	A	D	G	N	R	S	L	V	R	E	S	L	G	I	G	R	Y	G	H	G	T	L	T	H	M	V	G	V	I	F	D	A
Template Known Secondary structure					T	T					S	S											G	G	G		S									T	T																T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		237				.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		P	.	.	.	R	V	H	T	Q	K	Q	A	Y	I	L	Q	N	E	D	K	R	I	V	F	V	I	P	W	M	D	E	F	S	I	I	G	T	T	D	V	E	Y	K	G	D	P	K	A	V	K	I	E	E	S	E	I	N	Y	L	L	N	V	Y	N	T	H	F	K	K	Q	L	S	R	D	D	I	V	W	T	Y
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		D	L	S	G	I	M	E	P	G	T	T	G	W	Y	Y	L	H	H	P	E	F	K	G	T	F	G	P	T	D	R	P	D	R	H	T	L	F	V	E	Y	D	P	D	E	G	E	R	P	E	D	F	T	P	Q	R	C	V	E	L	I	G	L	A	L	D	A	P	E	V	K	P	E	L	V	D	I	Q	G	W	E
Template Known Secondary structure			G	G	G	T	S		T	T										S	S									S	S	T	T										T	T	T	T			G	G	G															T		S	S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	R	P	L	C	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	A	A	R	I	A	E	R
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions