Return to main results Retrieve Phyre Job Id

Job DescriptionP13035
Confidence99.13%DateThu Jan 5 11:33:30 GMT 2012
Rank152Aligned Residues259
% Identity17%Templatec3gmbB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:2-methyl-3-hydroxypyridine-5-carboxylic acid PDBTitle: crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic2 acid oxygenase
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIA
Query Conservation    








 
 
 
  

  
  
 



 
   


  





 
          
          
        
Alig confidence 

































.............
































Template Conservation   
 
 




 


  
  

  
  
 
 

  .............     
 
  
       
  


         
Template Sequence  TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSS. . . . . . . . . . . . . ELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSH
Template Known Secondary structure 



STT
SSS.............S



SSTT
TT
B
Template Predicted Secondary structure 










.............













Template SS confidence 















































































   11........20.........30.........40.... .....50.........60.........70.......
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  FPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRK
Query Conservation                                          
                      
 
      
   
   
Alig confidence 




















.....................................





















Template Conservation                       .....................................       
  
   
       
Template Sequence  TPPTYETWXHNKSVSKETFNG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LPWRIXTRSHLHDALVNRARAL
Template Known Secondary structure 

S
TT
GGG.....................................

Template Predicted Secondary structure 















.....................................







Template SS confidence 















































































   78.80.........90........ .100.........110.........120
 
   163......170.........180.........190.........200.........210.........220.........230........
Predicted Secondary structure 

























....
Query SS confidence 











































































. . . .
Query Sequence  GGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPR. . . .
Query Conservation 
  
     
  
                     
 
  





  
  
            
 
 

    
  ....
Alig confidence 




















........


















..

























....
Template Conservation                       ........       
  

 


  
.. 

  
                        
Template Sequence  GVDISVNSEAVAADPVGRLTL. . . . . . . . QTGEVLEADLIVGADGVGS. . KVRDSIGFKQDRWVSKDGLIRLIVPRXKKE
Template Known Secondary structure  T
S

TTT........SSS

S


TT
..



S


Template Predicted Secondary structure 





........








..















Template SS confidence 















































































   121........130.........140. ........150.........160 .........170.........180.........190
 
   239240.........250.........260.........270.........280.........290.........300.........310....
Predicted Secondary structure  ....







































Query SS confidence  . . . .











































































Query Sequence  . . . . VHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTHFKKQLSRDDIVWTYS
Query Conservation  ....                     
   
  


 
                 
  

      
   
    
    
Alig confidence  ....











































































Template Conservation                                                                                  
Template Sequence  LGHGEWDNTIDXWNFWPRVQRILYSPCNENELYLGLXAPAADPRGSSVPIDLEVWVEXFPFLEPCLIEAAKLKTARYDKY
Template Known Secondary structure 
SS
TTS

SSS


SSS
TT
TTTT
SS


GGGTT
TT



Template Predicted Secondary structure 











































Template SS confidence 















































































   191........200.........210.........220.........230.........240.........250.........260.........270
 
   315....320.
Predicted Secondary structure 


Query SS confidence 






Query Sequence  GVRPLCD
Query Conservation 



   
Alig confidence 






Template Conservation         
Template Sequence  ETTKLDS
Template Known Secondary structure  S
Template Predicted Secondary structure 






Template SS confidence 






   271......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions