Job Description P13035 Confidence 100.00% Date Thu Jan 5 11:33:30 GMT 2012 Rank 2 Aligned Residues 490 % Identity 30% Template c2rgoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alpha-glycerophosphate oxidase; PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	K	D	L	I	V	I	G	G	G	I	N	G	A	G	I	A	A	D	A	A	G	R	G	L	S	V	L	M	L	E	A	Q	D	L	A	C	A	T	S	S	A	S	S	K	L	I	H	G	G	L	R	Y	L	E	H	Y	E	F	R	L	V	S	E	A	L	A	E	R	E	V	L	L	K	M	A	P	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	L	D	L	L	I	I	G	G	G	I	T	G	A	G	V	A	V	Q	A	A	A	S	G	I	K	T	G	L	I	E	M	Q	D	F	A	E	G	T	S	S	R	S	T	K	L	V	H	G	G	I	R	Y	L	K	T	F	D	V	E	V	V	A	D	T	V	G	E	R	A	V	V	Q	G	I	A	P	H	I
Template Known Secondary structure		S										S												T	T	T								S	S	S	T	T		S	G	G	G	S	S		S						G	G	G	G	G	G	T																				T	T	S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																.	.	.	.																								.	.	.	.	.	.
Query SS confidence																.	.	.	.																								.	.	.	.	.	.
Query Sequence		A	F	P	M	R	F	R	L	P	H	R	P	H	L	.	.	.	.	R	P	A	W	M	I	R	I	G	L	F	M	Y	D	H	L	G	K	R	T	S	L	P	.	.	.	.	.	.	G	S	T	G	L	R	F	G	A	N	S	V	L	K	P	E	I	K	R	G	F	E	Y	S	D	C	W	V	D	D	A	R	L
Query Conservation																.	.	.	.																								.	.	.	.	.	.
Alig confidence																.	.	.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	P	D	P	M	L	L	P	I	Y	E	D	E	G	A	T	T	F	N	M	F	S	V	K	V	A	M	D	L	Y	D	K	L	A	N	V	T	G	T	K	Y	E	N	Y	T	L	T	P	E	E	V	L	E	R	E	P	F	L	K	K	E	G	L	K	G	A	G	V	Y	L	D	F	R	N	N	D	A	R	L
Template Known Secondary structure		S											S	S	S	S	S		S																	T	T		T	T	S	T	T															T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		V	L	A	N	A	Q	M	V	V	R	K	G	G	E	V	L	T	R	T	R	A	T	S	A	R	R	E	N	G	.	L	W	I	V	E	A	E	D	I	D	T	G	K	K	Y	S	W	Q	A	R	G	L	V	N	A	T	G	P	W	V	K	Q	F	F	D	D	G	M	H	L	P	S	P	Y	G	I	R	L	I	K
Query Conservation																															.
Alig confidence																															.
Template Conservation
Template Sequence		V	I	D	N	I	K	K	A	A	E	D	G	A	Y	L	V	S	K	M	K	A	V	G	F	L	Y	E	G	D	Q	I	V	G	V	K	A	R	D	L	L	T	D	E	V	I	E	I	K	A	K	L	V	I	N	T	S	G	P	W	V	D	K	V	R	N	L	N	F	T	R	P	V	S	P	K	M	R	P	T	K
Template Known Secondary structure												T	T						S									S	S	S	S									T	T	T	T															G	G	G						T	T		T	T	S						B
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.
Predicted Secondary structure														.	.	.																																																													.
Query SS confidence														.	.	.																																																													.
Query Sequence		G	S	H	I	V	V	P	R	V	H	T	Q	.	.	.	K	Q	A	Y	I	L	Q	N	E	D	K	R	I	V	F	V	I	P	W	M	D	E	F	S	I	I	G	T	T	D	V	E	Y	K	G	D	P	K	A	V	K	I	E	E	S	E	I	N	Y	L	L	N	V	Y	N	T	H	F	K	K	.	Q	L	S	R
Query Conservation														.	.	.																																																													.
Alig confidence														.	.	.																				.																																									.
Template Conservation																																				.
Template Sequence		G	I	H	L	V	V	D	A	K	K	L	P	V	P	Q	P	T	Y	F	D	T	G	K	Q	D	G	R	M	V	F	A	I	P	R	.	E	N	K	T	Y	F	G	T	T	D	T	D	Y	Q	G	D	F	T	D	P	K	V	T	Q	E	D	V	D	Y	L	L	D	V	I	N	H	R	Y	P	E	A	N	I	T	L
Template Known Secondary structure									G	G	G	S			S	S							S	S	S	S	S									.	T	T													S		S	S	S																			S	T	T	S				G
Template Predicted Secondary structure																																				.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.						.	.
Predicted Secondary structure																					.	.	.																																																				.	.	.	.	.
Query SS confidence																					.	.	.																																																				.	.	.	.	.
Query Sequence		D	D	I	V	W	T	Y	S	G	V	R	P	L	C	D	D	E	S	D	.	.	.	S	P	Q	A	I	T	R	D	Y	T	L	D	I	H	D	E	N	G	K	A	P	L	L	S	V	F	G	G	K	L	T	T	Y	R	K	L	A	E	H	A	L	E	K	L	T	P	Y	Y	Q	G	I	.	.	.	.	.	G	P
Query Conservation																					.	.	.																																																				.	.	.	.	.
Alig confidence																					.	.	.																	.	.	.	.																																.	.	.	.	.
Template Conservation																																								.	.	.	.
Template Sequence		A	D	I	E	A	S	W	A	G	L	R	P	L	L	I	G	N	S	G	S	D	Y	N	G	G	T	I	S	R	G	S	S	L	E	R	E	P	D	.	.	.	.	G	L	L	T	L	S	G	G	K	I	T	D	Y	R	K	M	A	E	G	A	L	R	L	I	R	Q	L	L	K	E	E	Y	G	I	E	T	K	E
Template Known Secondary structure		G	G												B	T	T			G	G	G	G	T	T				S	T	T							T	T	.	.	.	.	S									G	G	G
Template Predicted Secondary structure																																								.	.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.					.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.				.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		A	W	T	K	E	S	V	L	P	G	G	A	I	E	G	D	R	D	D	Y	A	A	R	L	R	R	R	.	.	.	Y	P	F	L	T	E	S	L	A	R	H	Y	A	R	T	Y	G	S	N	S	E	L	L	L	G	N	A	G	T	V	S	D	L	G	E	D	F	G	H	E	F	Y	E	A	E	L	K	Y	L	V
Query Conservation																													.	.	.
Alig confidence																													.	.	.																																			.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		I	D	S	K	K	Y	Q	I	S	G	G	N	F	D	P	T	K	L	E	E	T	V	T	E	L	A	K	E	G	V	A	A	G	L	E	E	E	D	A	T	Y	I	A	D	F	Y	G	T	N	A	R	R	I	F	E	L	A	K	E	A	P	Y	P	G	.	.	.	L	S	L	A	E	S	A	R	L	R	Y	G	L
Template Known Secondary structure				T	T	T				T	T			S		T	T															T	T	T														G	G	G														T	T	.	.	.
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.				.	.	.	.	.	.	.	530	.	.	.	.	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	E	W	V	R	R	A	D	D	A	L	W	R	R	T	K	Q	G	M	W	L	N	A	D	Q	Q	S	R	V	S	Q	W	L	V	E	Y	T	Q	Q	R	L	S	L	A
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		E	E	E	M	V	L	A	P	G	D	Y	L	I	R	R	T	N	H	L	.	L	F	E	R	D	Q	L	D	E	I	K	Q	P	V	I	D	A	I	A	E	Y	F	G	W	T
Template Known Secondary structure				S				S							T	T	S	S			.				G	G	G																	T
Template Predicted Secondary structure																					.
Template SS confidence
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.		.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580