Job Description P13035 Confidence 99.55% Date Thu Jan 5 11:33:30 GMT 2012 Rank 61 Aligned Residues 329 % Identity 13% Template c2e4gB_ PDB info PDB header:biosynthetic protein, flavoprotein Chain: B: PDB Molecule:tryptophan halogenase; PDBTitle: rebh with bound l-trp Resolution 2.08 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.													.	.	.	.	.
Query SS confidence																							.	.	.													.	.	.	.	.
Query Sequence		D	L	I	V	I	G	G	G	I	N	G	A	G	I	A	A	D	A	A	G	R	.	.	.	G	L	S	V	L	M	L	E	A	Q	D	L	.	.	.	.	.	A	C	A	T	S	S	A	S	S	K	L	I	H	G	G	L	R	Y	L	E	H	Y	E	F	R	L	V	S	E	A	L	A	E	R	E	V	L	L	K
Query Conservation																							.	.	.													.	.	.	.	.
Alig confidence																							.	.	.													.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	L	I	V	G	G	G	T	A	G	W	M	A	A	S	Y	L	G	K	A	L	Q	G	T	A	D	I	T	L	L	Q	A	P	D	I	P	T	L	G	V	G	E	A	T	I	P	N	L	Q	T	A	F	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	G	I	P	E	D	E	W	M	R	E
Template Known Secondary structure									S														T	T	T	S																						T						T			.	.	.	.	.	.	.	.	.	.	.	.	.			T
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.														.	.	.	.	.	.	.	.	70	.	.	.
		77	.	.																														80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	A	F	P	M	R	F	R	L	P	H	R	P	H	L	R	P	A	W	M	I	R	I	G	L	F	M	Y	D	H	L	G	K	R	T	S	L	P	G	S	T	G	L	R	F	G	A
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	N	A	S	Y	K	V	A	I	K	F	I	N	W	R	T	A	G	E	G	T	S	E	A	R	E	L	D	G	G	P	D	H	F	Y	H	S	F	G	L	L	K	Y	H	E	Q	I	P	L	S	H	Y	W	F	D	R	S	Y	R	G	K	T	V	E	P	F	D	Y	A	C	Y	K	E	P	V	I	L	D	A	N
Template Known Secondary structure		T	T											S	S	S	S		S				S	S					T	T			S						S	S						T	T													T	T	S											S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	V	L	K	P	E	I	K	R	G	F	E	Y	S	D	C	W	V	D	D	A	R	L	V	L	A	N	A	Q	M	V	V	R	K	G	G	E	V	L	T	R	T	R	A	T	S	A	R	R	E	N	G	L	W	I	V	E	A	E	D	I	D	T	G	K	K	Y	S	W	Q	A	R	G	L	V	N	A	T	G
Query Conservation
Alig confidence														.																																															.	.	.
Template Conservation														.																																															.	.	.
Template Sequence		R	S	P	R	R	L	D	G	S	K	V	T	.	N	Y	A	W	H	F	D	A	H	L	V	A	D	F	L	R	R	F	A	T	E	K	L	G	V	R	H	V	E	D	R	V	E	H	V	Q	R	D	A	N	G	N	I	E	S	V	.	.	.	R	T	A	T	G	R	V	F	D	A	D	L	F	V	D	C	S	G
Template Known Secondary structure		B		S	B		T	T			B		S	.																							S																T	T	S						.	.	.			T	T	S						S							G
Template Predicted Secondary structure														.																																															.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																															.	.	.	.	.
Query SS confidence																															.	.	.	.	.
Query Sequence		P	W	V	K	Q	F	F	D	D	G	M	H	L	P	S	P	Y	G	I	R	L	I	K	G	S	H	I	V	V	.	.	.	.	.	P	R	V	H	T	Q	K	Q	A	Y	I	L	Q	N	E	D	K	R	I	V	F	V	I	P	W	M	D	E	F	S	I	I	G	T	T	D	V	E	Y	K	G	D	P	K	A	V
Query Conservation																															.	.	.	.	.
Alig confidence																															.	.	.	.	.																										.										.	.	.	.	.	.	.
Template Conservation																																																													.										.	.	.	.	.	.	.
Template Sequence		F	R	G	L	L	I	N	K	A	M	E	E	P	F	L	D	M	S	D	H	L	L	N	D	S	A	V	A	T	Q	V	P	H	D	D	D	A	N	G	V	E	P	F	T	S	A	I	A	M	K	S	G	W	T	W	K	I	P	M	.	L	G	R	F	G	T	G	Y	V	.	.	.	.	.	.	.	Y	S	S	R
Template Known Secondary structure		G	G								S								T	T	T																						S	S							S	S									.	S	S								.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																																													.										.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.								.	.	300	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	E	E	S	E	I	N	Y	L	L	N	V	Y	N	T	H	F	K	K	Q	L	S	R	D	D	I	V	W	T	Y	S	G	V	R	P	L	C	D	D	E	S	D	S	P	Q	A	I	T	R	D	Y	T	L	D	I	H	D	E	N	G	K	A	P	L	L	S	V	F	G	G	K	L	T	T	Y	R	K	L	A
Query Conservation
Alig confidence																					.																.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																					.																.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		F	A	T	E	D	E	A	V	R	E	F	C	E	M	W	H	L	D	P	.	E	T	Q	P	L	N	R	I	R	F	R	V	G	R	N	.	.	.	.	.	.	.	.	.	.	R	R	A	W	V	G	N	C	V	S	I	G	T	S	S	C	F	V	E	P	L	.	.	.	.	.	.	E	S	T	G	I	Y	F	V
Template Known Secondary structure		T	S													T	T			T	.	T	T	S													.	.	.	.	.	.	.	.	.	.	S		S			T	T					S	T	T	T					S	T	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																					.																.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.											.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.							.	.	.	360	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	A	L	E	K	L	T	P	Y	Y	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	A	L	Y	Q	L	V	K	H	F	P	D
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions