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Job DescriptionP13035
Confidence99.25%DateThu Jan 5 11:33:30 GMT 2012
Rank133Aligned Residues115
% Identity18%Templatec1hyuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:alkyl hydroperoxide reductase subunit f; PDBTitle: crystal structure of intact ahpf
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHI
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Template Sequence  DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER. . FGGQVLDTVDIEN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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STT


SS..TTGGGTT
S
B

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   211........220.........230.........240.... .....250.......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YISVPKTEGQKLAGALKAHVSD
Template Known Secondary structure  ..........................................................BTTBSSB
T
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   258.260.........270.........
 
   162.......170.........180.........190.........200.........
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Query Sequence  KGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPW
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Template Sequence  YDVDVIDSQSASKLVPAATEGGLHQIETASGA. . VLKARSIIIATGAK
Template Known Secondary structure  S

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   280.........290.........300.........310. ........320.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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